FFCP PHASE1:Hg19::chr16:12058961..12058966,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:12058961..12058966,+
|short_description=p5@TNFRSF17
|description=CAGE_peak_5_at_TNFRSF17_5end
|association_with_transcript=0bp_to_ENST00000053243,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=608 | |EntrezGene=608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11913 | |HGNC=11913 | ||
|TSSclassifier=strong | |||
|UniProt=Q02223,E7EQ20 | |UniProt=Q02223,E7EQ20 | ||
|association_with_transcript=0bp_to_ENST00000053243,ENST00000435355,NM_001192,uc002dbv.2,uc010buy.2,uc010buz.2_5end | |||
|cluster_id=chr16:12058961..12058966,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_TNFRSF17_5end | |||
|id=chr16:12058961..12058966,+ | |||
|ontology_enrichment_celltype=CL:0000945!9.57e-75!24;CL:0000826!9.57e-75!24;CL:0000236!3.23e-42!14;CL:0000542!3.56e-34!53;CL:0000051!3.56e-34!53;CL:0000838!1.27e-31!52;CL:0002087!3.61e-16!119;CL:0000738!3.56e-14!140;CL:0000817!1.16e-12!3;CL:0002031!2.49e-11!124;CL:0000037!2.01e-10!172;CL:0000566!2.01e-10!172;CL:0000988!1.58e-09!182;CL:0000785!3.84e-09!2;CL:0000955!3.84e-09!2;CL:0000818!3.84e-09!2;CL:0000954!3.84e-09!2;CL:0000816!3.84e-09!2;CL:0002032!3.47e-08!165;CL:0000837!3.47e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.04e-83;24!CL:0000236;1.19e-44;13!CL:0000542;1.07e-24;53!CL:0002087;9.63e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.71e-83,24;CL:0000826,2.71e-83,24;CL:0000542,1.49e-41,53;CL:0000051,1.49e-41,53;CL:0000236,2.17e-41,14;CL:0000838,3.28e-37,52;CL:0002087,1.36e-17,115;CL:0000738,1.61e-16,136;CL:0002031,1.35e-14,120;CL:0000037,7.35e-13,168;CL:0000988,4.57e-12,177;CL:0002032,7.72e-12,161;CL:0000837,7.72e-12,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.07e-24;53!UBERON:0006298;3.29e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!2.04e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:630;3.29e-10;1!DOID:0050177;3.29e-10;1!DOID:4960;3.29e-10;1!DOID:0070004;3.29e-10;1!DOID:12603;3.29e-10;1!DOID:0050427;3.29e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.01e-10,1;DOID:0070004,3.01e-10,1;DOID:12603,3.61e-10,1;DOID:630,3.96e-10,1;DOID:0050177,3.96e-10,1;DOID:0050427,3.96e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;3.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.29e-10,1;UBERON:0006298,3.29e-10,1 | |||
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| ||
|short_description=p5@TNFRSF17 | |||
}} | }} |
Latest revision as of 07:40, 20 September 2015
Short description: | p5@TNFRSF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFRSF17_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000053243, ENST00000435355, NM_001192, uc002dbv.2, uc010buy.2, uc010buz.2_5end |
EntrezGene: | TNFRSF17 |
HGNC: | 11913 |
UniProt: | Q02223E7EQ20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.71e-83 | 24 |
pro-B cell | 2.71e-83 | 24 |
lymphocyte | 1.49e-41 | 53 |
common lymphoid progenitor | 1.49e-41 | 53 |
B cell | 2.17e-41 | 14 |
lymphoid lineage restricted progenitor cell | 3.28e-37 | 52 |
nongranular leukocyte | 1.36e-17 | 115 |
leukocyte | 1.61e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.35e-14 | 120 |
hematopoietic stem cell | 7.35e-13 | 168 |
hematopoietic cell | 4.57e-12 | 177 |
hematopoietic oligopotent progenitor cell | 7.72e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.72e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.29e-10 | 1 |
submandibular gland primordium | 3.29e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.01e-10 | 1 |
myeloma | 3.01e-10 | 1 |
acute leukemia | 3.61e-10 | 1 |
genetic disease | 3.96e-10 | 1 |
monogenic disease | 3.96e-10 | 1 |
xeroderma pigmentosum | 3.96e-10 | 1 |