FFCP PHASE1:Hg19::chr19:58898201..58898213,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr19:58898201..58898213,+ to FFCP PHASE1:Hg19::chr19:58898201..58898213,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6193 | |EntrezGene=6193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10426 | |HGNC=10426 | ||
|TSSclassifier=strong | |||
|UniProt=P46782 | |UniProt=P46782 | ||
|association_with_transcript=-422bp_to_ENST00000196551,NM_001009,uc002qsn.2_5end | |||
|cluster_id=chr19:58898201..58898213,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_5_at_RPS5_5end | |||
|id=chr19:58898201..58898213,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.34e-13!254 | |||
|ontology_enrichment_celltype_v019=CL:0002581;6.72e-26;1!CL:0000307;1.10e-09;3!CL:0002592;1.47e-09;3!CL:0002178;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.61e-26,1;CL:0000068,1.10e-09,3;CL:0000069,1.10e-09,3;CL:0000307,1.10e-09,3;CL:0000377,1.10e-09,3;CL:0002592,1.19e-09,3;CL:0002178,1.81e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.10e-09;3 | |||
|ontology_enrichment_disease=DOID:0050687!3.24e-19!143;DOID:305!1.51e-17!106;DOID:162!1.97e-15!235;DOID:14566!2.24e-15!239;DOID:0050615!2.05e-07!16;DOID:1324!9.57e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.49e-07;15!DOID:5409;1.75e-07;4!DOID:0050615;3.90e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.59e-07,15;DOID:5409,1.92e-07,4;DOID:0050615,4.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.59e-07!169;UBERON:0000925!6.59e-07!169;UBERON:0006595!6.59e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.14e-13;2!UBERON:0003498;1.47e-09;3!UBERON:0005985;1.47e-09;3!UBERON:0001621;1.47e-09;3!UBERON:0000072;2.44e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,9.40e-14,2;UBERON:0001621,1.19e-09,3;UBERON:0005178,3.22e-07,34;UBERON:0002224,3.22e-07,34;UBERON:0005181,4.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.61246251376468,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.292311015483596,0.252433774244115,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,0.248107807818777,0,0,0.256278298511402,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0.593042257361244,0.123563938946503,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0,6.61423045423767,0.207376382794494,0.664653872707185,0.330991955875499,0,0,1.42304773014896,0.277349346026277,0,0.0979923974143777,0.435296032902013,0,0.171986032471617,0.483781656445426,0.219267951258557,0.410577285266046,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,1.00863292007874,0,0,0.720273989940749,0,0.235694034616795,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.492137407573744,0.254019996197353,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.528001682597033,0.179287339332845,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0.643324774124777,0.521988583930423,0,0,0.489473409012935,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,1.15748422962549,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0.231051332300676,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.397901550322736,0.237840181555137,0.11294608203896,0,1.05673990496671,0,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.401206833445841,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.61246251376468,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.292311015483596,0.252433774244115,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,0.248107807818777,0,0,0.256278298511402,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0.593042257361244,0.123563938946503,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0,6.61423045423767,0.207376382794494,0.664653872707185,0.330991955875499,0,0,1.42304773014896,0.277349346026277,0,0.0979923974143777,0.435296032902013,0,0.171986032471617,0.483781656445426,0.219267951258557,0.410577285266046,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,1.00863292007874,0,0,0.720273989940749,0,0.235694034616795,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0.492137407573744,0.254019996197353,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.528001682597033,0.179287339332845,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0.246277562248017,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0.643324774124777,0.521988583930423,0,0,0.489473409012935,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,1.15748422962549,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0.231051332300676,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.397901550322736,0.237840181555137,0.11294608203896,0,1.05673990496671,0,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0.352894871715692,0.401206833445841,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p5@RPS5 | |||
}} | }} |
Latest revision as of 07:35, 20 September 2015
Short description: | p5@RPS5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RPS5_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -422bp_to_ENST00000196551, NM_001009, uc002qsn.2_5end |
EntrezGene: | RPS5 |
HGNC: | 10426 |
UniProt: | P46782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.61e-26 | 1 |
duct epithelial cell | 1.10e-09 | 3 |
branched duct epithelial cell | 1.10e-09 | 3 |
tracheal epithelial cell | 1.10e-09 | 3 |
tracheoblast | 1.10e-09 | 3 |
smooth muscle cell of the coronary artery | 1.19e-09 | 3 |
epithelial cell of stomach | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 9.40e-14 | 2 |
coronary artery | 1.19e-09 | 3 |
thoracic cavity element | 3.22e-07 | 34 |
thoracic cavity | 3.22e-07 | 34 |
thoracic segment organ | 4.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.59e-07 | 15 |
lung small cell carcinoma | 1.92e-07 | 4 |
respiratory system cancer | 4.14e-07 | 16 |