FFCP PHASE1:Hg19::chr9:116343192..116343225,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:116343192..116343225,+ to FFCP PHASE1:Hg19::chr9:116343192..116343225,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5998 | |EntrezGene=5998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9999 | |HGNC=9999 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6G2 | |UniProt=C9J6G2 | ||
|association_with_transcript=0bp_to_ENST00000471324_5end | |||
|cluster_id=chr9:116343192..116343225,+ | |||
|description=CAGE_peak_5_at_RGS3_5end | |||
|id=chr9:116343192..116343225,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.22e-44!119;CL:0000738!3.90e-41!140;CL:0000037!2.22e-37!172;CL:0000566!2.22e-37!172;CL:0002031!2.32e-37!124;CL:0002032!6.39e-36!165;CL:0000837!6.39e-36!165;CL:0000988!1.31e-34!182;CL:0002057!3.65e-27!42;CL:0002194!1.40e-25!63;CL:0000576!1.40e-25!63;CL:0000040!1.40e-25!63;CL:0000559!1.40e-25!63;CL:0000766!1.48e-25!76;CL:0002009!7.08e-24!65;CL:0000860!1.10e-23!45;CL:0000839!6.49e-22!70;CL:0000557!1.69e-20!71;CL:0000763!5.82e-19!112;CL:0000049!5.82e-19!112;CL:0000542!2.82e-16!53;CL:0000051!2.82e-16!53;CL:0000838!3.49e-16!52;CL:0000945!6.41e-13!24;CL:0000826!6.41e-13!24;CL:0000236!2.61e-07!14;CL:0002393!4.78e-07!9;CL:0002397!4.78e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.36e-27;39!CL:0000234;1.36e-27;39!CL:0000860;7.74e-27;33!CL:0002057;7.74e-27;33!CL:0000576;1.20e-23;48!CL:0000766;2.14e-18;69!CL:0000945;1.18e-17;24!CL:0002087;2.05e-14;104!CL:0000738;1.54e-12;136!CL:0000763;2.48e-10;100!CL:0000236;2.53e-09;13!CL:0000542;1.65e-08;53!CL:0000988;4.12e-08;177!CL:0000235;2.36e-07;6!CL:0000094;4.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.10e-54,115;CL:0000738,1.46e-52,136;CL:0002031,7.91e-48,120;CL:0000037,9.14e-46,168;CL:0002032,7.85e-45,161;CL:0000837,7.85e-45,161;CL:0000473,1.71e-43,48;CL:0000234,1.71e-43,48;CL:0000988,4.65e-43,177;CL:0000766,1.73e-42,72;CL:0002194,1.41e-41,59;CL:0000576,1.41e-41,59;CL:0000040,1.41e-41,59;CL:0000559,1.41e-41,59;CL:0002009,1.77e-39,61;CL:0000860,1.78e-37,42;CL:0002057,1.78e-37,42;CL:0000839,4.10e-36,66;CL:0000557,2.28e-35,67;CL:0000763,4.69e-30,108;CL:0000049,4.69e-30,108;CL:0000945,1.81e-17,24;CL:0000826,1.81e-17,24;CL:0000838,1.67e-13,52;CL:0000542,5.02e-13,53;CL:0000051,5.02e-13,53;CL:0002320,5.41e-10,361;CL:0000134,8.54e-10,354;CL:0000236,1.28e-09,14;CL:0002393,2.98e-09,9;CL:0002397,2.98e-09,9;CL:0000235,2.57e-07,6;CL:0000094,4.95e-07,8;CL:0000219,7.05e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.55e-27;42!CL:0000049;3.38e-10;108!CL:0000051;1.65e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.93e-30!102;UBERON:0003061!2.93e-30!102;UBERON:0002193!5.93e-26!112;UBERON:0002371!1.36e-22!80;UBERON:0001474!5.75e-21!86;UBERON:0004765!2.65e-17!101;UBERON:0001434!2.65e-17!101;UBERON:0002405!6.25e-16!115;UBERON:0007023!2.50e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;9.17e-10;32!UBERON:0000178;1.17e-08;15!UBERON:0000179;1.17e-08;15!UBERON:0000463;1.17e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.93e-46,98;UBERON:0003061,3.93e-46,98;UBERON:0002193,1.06e-41,108;UBERON:0002371,1.03e-34,76;UBERON:0002405,1.30e-33,93;UBERON:0001474,1.93e-31,82;UBERON:0004765,1.06e-27,90;UBERON:0001434,1.24e-22,100;UBERON:0003081,4.03e-12,203;UBERON:0002384,1.53e-09,371;UBERON:0000178,1.02e-08,15;UBERON:0000179,1.02e-08,15;UBERON:0000463,1.02e-08,15;UBERON:0002204,1.28e-07,167 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0.522371256399677,2.45733936501509,4.88460817580699,0.436882744260345,0.791300934685361,0.990130823680373,0.662794751455832,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0.125542639594803,6.265899271332,3.44822475689772,4.80135766013443,3.54027849164014,1.15148819429164,3.56077083626975,0.919421224478927,0,0,17.6625217323088,7.2506308568585,0.587200878669695,3.32397245119126,5.61524452916397,4.34021741431704,8.95661896959697,5.83008598834163,6.43938919085466,35.6225685009934,24.1840603960838,24.2584061187816,9.52959051313307,4.52284676824008,5.88442104700697,8.91846416198666,13.0641960329841,4.96612682766029,3.10271112662957,2.5819387343353,4.06279459783025,12.8004790888971,2.72906150057846,4.49446968890169,4.89734227793444,5.45579346029359,5.75403413219137,33.644832619045,29.1216940127583,28.9832830362232,7.2552309657146,3.97169657283798,8.09668923694247,12.0599359323237,7.82224377630302,8.68755378820467,7.26479403160043,3.68277635987565,4.74693581161327,15.4216359007718,11.0554235981823,10.4829322754188,16.9616233031208,11.263266963113,11.4115166554927,11.4005097496499,9.34908382835724,10.5945209183488,5.27988733383968,4.36910889009705,2.66852776159066,6.40095333849761,7.20712776664822,4.59801951963587,9.25462821898807,5.72432252721218,1.1384259382189,2.34894875748376,1.14681968437569,1.32171328579026,0,0.790152254325231,0.590129310341499,0.393010762749165,0.616804496998528,0.167186495390678,0.651844533267181,0.473447805734733,0,0.891283655081389,0.294605907474837,0.221533894583621,0,2.30564375506215,1.04047478047903,0.822189523018381,0.552700035571697,1.44901542867526,1.4828656316206,1.07016331235885,0,2.37949619664889,1.91610246800961,1.03088233644789,1.26509846009751,4.77848121486145,2.60433381542567,0.950452044448374,2.86092726247768,6.14335733541208,1.24930726552346,3.55165878066025,2.46338399076314,1.00803371612366,0.534880391567015,1.01377082717959,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,1.76821751921912,0,0.741568885568859,6.81549526674835,7.31344896656922,7.31268782853758,0,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0.872188104285069,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42907919878425,0.491337269247072,1.13658359293342,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,0,0,2.94848165003288,0.590789906681404,0,0.245976877086227,0,0,0,0.301586917234893,0,0,0,0,0.115930404975077,0,0,0,0,2.37061319387782,2.57545848628462,14.280586353069,11.9342175221011,13.9713292551405,0,0,0.425325291727159,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.771622122786426,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,13.378615870531,16.5744840172602,4.21667878966063,0,0,1.42636905040718,2.46128221334885,4.31500277355805,6.26713371339634,0.112085143993527,0.394061520403854,0.215627574859517,0.641715181398742,0,0,0,0,0,8.23907726341901,5.9832291840805,7.87389475528467,0.36807447515742,3.00102312635806,0.813795071099207,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,1.37060810223918,1.02943027143257,3.72182447021197,3.8828556147351,3.842192080924,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0,0.902399225814824,0,0.784349769176855,1.46139224653261,0,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.671624264166535,0.657779629937804,1.5686127061494,0,0.656029291399411,0.976135183992909,2.57602529119306,0.915694648183434,0.330037999682352,0.574265537996172,0,0,0.48335359146061,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0.681813019328807,0.267096106940212,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,1.29151611801369,0,0,0,14.7159806677329,16.8220185571323,11.9625909306574,12.1498205483472,14.3976795580168,16.8603060910106,11.8806916192385,15.8625035258854,0,0,0.245040215981032,0.743212700502875,1.87549976869378,0.0711418433484141,0.159426272728822,6.38653988585013,1.34053759092657,0.846694330895531,0,5.33514638415572,2.51058146936511,0.156679895773023,2.50634477090067,0.169291777801603,0.481764225311099,0.605399121573143,0,4.80907482658071,0,0,0.500547425135725,1.17232857241224,0,0,0,0,0,1.8714054040822,1.75809815126273,0,0.111443384277478,0,3.34242278632766,0.890894042497916,7.37185685038157,0.994147647766298,0.422008249231538,0,2.63686198762815,0,3.58646378851925,3.59169090190492,0,0,8.1235971604305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| ||
|short_description=p5@RGS3 | |||
}} | }} |
Latest revision as of 07:24, 20 September 2015
Short description: | p5@RGS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RGS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000471324_5end |
EntrezGene: | RGS3 |
HGNC: | 9999 |
UniProt: | C9J6G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.93e-46 | 98 |
blood island | 3.93e-46 | 98 |
hemolymphoid system | 1.06e-41 | 108 |
bone marrow | 1.03e-34 | 76 |
immune system | 1.30e-33 | 93 |
bone element | 1.93e-31 | 82 |
skeletal element | 1.06e-27 | 90 |
skeletal system | 1.24e-22 | 100 |
lateral plate mesoderm | 4.03e-12 | 203 |
connective tissue | 1.53e-09 | 371 |
blood | 1.02e-08 | 15 |
haemolymphatic fluid | 1.02e-08 | 15 |
organism substance | 1.02e-08 | 15 |
musculoskeletal system | 1.28e-07 | 167 |