FFCP PHASE2:Hg19::chr18:68318174..68318193,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:220158 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18406 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=220158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18406 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q86UQ5 | ||
|association_with_transcript=-81bp_to_AY262164_5end | |association_with_transcript=-81bp_to_AY262164_5end | ||
|cluster_id=chr18:68318174..68318193,- | |cluster_id=chr18:68318174..68318193,- |
Latest revision as of 07:16, 20 September 2015
Short description: | p1@GTSCR1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GTSCR1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -81bp_to_AY262164_5end |
EntrezGene: | GTSCR1 |
HGNC: | 18406 |
UniProt: | Q86UQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@GTSCR1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mature alpha-beta T cell | 2.93e-90 | 18 |
alpha-beta T cell | 2.93e-90 | 18 |
immature T cell | 2.93e-90 | 18 |
mature T cell | 2.93e-90 | 18 |
immature alpha-beta T cell | 2.93e-90 | 18 |
T cell | 3.00e-64 | 25 |
pro-T cell | 3.00e-64 | 25 |
CD8-positive, alpha-beta T cell | 8.78e-54 | 11 |
CD4-positive, alpha-beta T cell | 4.19e-44 | 6 |
lymphoid lineage restricted progenitor cell | 1.80e-29 | 52 |
Showing 1 to 10 of 31 entries