FFCP PHASE1:Hg19::chrX:18622107..18622118,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:18622107..18622118,+
|short_description=p4@CDKL5
|description=CAGE_peak_4_at_CDKL5_5end
|association_with_transcript=40bp_to_ENST00000463994_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6792 | |EntrezGene=6792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11411 | |HGNC=11411 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000463994_5end | |||
|cluster_id=chrX:18622107..18622118,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_4_at_CDKL5_5end | |||
|id=chrX:18622107..18622118,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.83e-14;3!CL:0000235;5.92e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.09e-14,3;CL:0000235,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.21e-40;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.57e-33!34;UBERON:0003528!6.57e-33!34;UBERON:0001893!3.42e-32!34;UBERON:0002791!2.70e-31!33;UBERON:0001869!3.21e-30!32;UBERON:0001049!1.09e-29!57;UBERON:0005068!1.09e-29!57;UBERON:0006241!1.09e-29!57;UBERON:0007135!1.09e-29!57;UBERON:0002780!1.55e-29!41;UBERON:0001890!1.55e-29!41;UBERON:0006240!1.55e-29!41;UBERON:0003080!1.33e-28!42;UBERON:0000955!1.99e-28!69;UBERON:0006238!1.99e-28!69;UBERON:0002616!2.47e-28!59;UBERON:0002619!7.94e-28!22;UBERON:0001017!1.99e-26!82;UBERON:0001950!7.21e-25!20;UBERON:0000073!1.29e-24!94;UBERON:0001016!1.29e-24!94;UBERON:0005743!1.43e-24!86;UBERON:0007023!2.82e-24!115;UBERON:0000956!8.64e-24!25;UBERON:0000203!8.64e-24!25;UBERON:0003056!3.72e-18!61;UBERON:0003075!3.97e-18!86;UBERON:0007284!3.97e-18!86;UBERON:0002346!8.49e-17!90;UBERON:0000153!5.05e-16!129;UBERON:0007811!5.05e-16!129;UBERON:0000033!7.43e-15!123;UBERON:0004121!5.37e-14!169;UBERON:0000924!2.53e-13!173;UBERON:0006601!2.53e-13!173;UBERON:0002420!5.73e-11!9;UBERON:0007245!5.73e-11!9;UBERON:0010009!5.73e-11!9;UBERON:0010011!5.73e-11!9;UBERON:0000454!5.73e-11!9;UBERON:0002308!1.60e-10!9;UBERON:0000125!1.60e-10!9;UBERON:0001871!1.28e-09!7;UBERON:0000200!2.03e-09!6;UBERON:0001872!4.19e-09!5;UBERON:0000468!5.14e-09!659;UBERON:0000349!8.71e-09!5;UBERON:0000062!1.04e-08!511;UBERON:0009663!4.57e-08!7;UBERON:0000467!4.79e-08!625;UBERON:0000922!4.99e-08!612;UBERON:0000480!5.51e-08!626;UBERON:0000477!1.60e-07!286;UBERON:0000475!3.95e-07!365;UBERON:0000369!4.77e-07!4;UBERON:0002435!4.77e-07!4;UBERON:0000204!4.77e-07!4;UBERON:0010082!4.77e-07!4;UBERON:0000025!6.45e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.21e-40;1!UBERON:0001567;2.21e-40;1!UBERON:0002771;3.11e-21;2!UBERON:0001829;5.69e-21;2!UBERON:0004089;5.69e-21;2!UBERON:0002021;3.22e-09;5!UBERON:0001950;1.37e-08;20!UBERON:0000200;5.54e-08;6!UBERON:0002619;6.29e-08;22!UBERON:0001044;6.78e-08;6!UBERON:0003688;6.78e-08;6!UBERON:0003293;6.78e-08;6!UBERON:0003294;6.78e-08;6!UBERON:0010047;6.78e-08;6!UBERON:0003408;6.78e-08;6!UBERON:0000167;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6!UBERON:0000956;4.02e-07;25!UBERON:0000203;4.02e-07;25!UBERON:0001871;5.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.48e-40,1;UBERON:0001567,1.48e-40,1;UBERON:0008801,1.48e-40,1;UBERON:0002771,3.11e-21,2;UBERON:0001829,4.66e-21,2;UBERON:0004089,4.66e-21,2;UBERON:0002021,3.22e-09,5;UBERON:0001950,1.37e-08,20;UBERON:0000200,5.54e-08,6;UBERON:0002619,6.29e-08,22;UBERON:0001044,6.34e-08,6;UBERON:0003293,6.34e-08,6;UBERON:0003294,6.34e-08,6;UBERON:0010047,6.34e-08,6;UBERON:0000167,6.34e-08,6;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0000956,4.02e-07,25;UBERON:0000203,4.02e-07,25;UBERON:0001871,5.08e-07,6 | |||
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| ||
|short_description=p4@CDKL5 | |||
}} | }} |
Latest revision as of 07:15, 20 September 2015
Short description: | p4@CDKL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDKL5_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 40bp_to_ENST00000463994_5end |
EntrezGene: | CDKL5 |
HGNC: | 11411 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.09e-14 | 3 |
macrophage | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.48e-40 | 1 |
cheek | 1.48e-40 | 1 |
parotid gland primordium | 1.48e-40 | 1 |
middle temporal gyrus | 3.11e-21 | 2 |
major salivary gland | 4.66e-21 | 2 |
midface | 4.66e-21 | 2 |
occipital lobe | 3.22e-09 | 5 |
neocortex | 1.37e-08 | 20 |
gyrus | 5.54e-08 | 6 |
regional part of cerebral cortex | 6.29e-08 | 22 |
saliva-secreting gland | 6.34e-08 | 6 |
gland of oral region | 6.34e-08 | 6 |
gland of foregut | 6.34e-08 | 6 |
oral gland | 6.34e-08 | 6 |
oral cavity | 6.34e-08 | 6 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
cerebral cortex | 4.02e-07 | 25 |
pallium | 4.02e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |