FFCP PHASE1:Hg19::chr18:68318103..68318116,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220158 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18406 | |||
|TSSclassifier=strong | |||
|UniProt=Q86UQ5 | |||
|association_with_transcript=-10bp_to_AY262164_5end | |||
|cluster_id=chr18:68318103..68318116,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_2_at_GTSCR1_5end | |||
|id=chr18:68318103..68318116,- | |||
|ontology_enrichment_celltype=CL:0000791!3.19e-61!18;CL:0000789!3.19e-61!18;CL:0002420!3.19e-61!18;CL:0002419!3.19e-61!18;CL:0000790!3.19e-61!18;CL:0000084!3.81e-43!25;CL:0000827!3.81e-43!25;CL:0000625!4.70e-37!11;CL:0000624!5.53e-30!6;CL:0000838!1.44e-24!52;CL:0000542!4.96e-24!53;CL:0000051!4.96e-24!53;CL:0000898!3.59e-16!3;CL:0000842!1.57e-15!3;CL:0002087!2.13e-15!119;CL:0000738!9.25e-14!140;CL:0000224!8.83e-12!4;CL:0000815!9.57e-12!2;CL:0000792!9.57e-12!2;CL:0002677!9.57e-12!2;CL:0002031!2.33e-10!124;CL:0000037!2.77e-10!172;CL:0000566!2.77e-10!172;CL:0000988!1.89e-09!182;CL:0000080!5.22e-08!6;CL:0002032!9.85e-08!165;CL:0000837!9.85e-08!165;CL:0000623!2.59e-07!3;CL:0000825!2.59e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.73e-57;18!CL:0000789;8.73e-57;18!CL:0002419;8.73e-57;18!CL:0000625;8.09e-50;11!CL:0000084;1.96e-40;25!CL:0000815;1.31e-18;2!CL:0000792;1.31e-18;2!CL:0002677;1.31e-18;2!CL:0000624;1.13e-13;6!CL:0000898;9.93e-13;3!CL:0000542;2.44e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.47e-57,18;CL:0000789,7.47e-57,18;CL:0002420,7.47e-57,18;CL:0002419,7.47e-57,18;CL:0000790,7.47e-57,18;CL:0000625,1.19e-49,11;CL:0000084,1.75e-40,25;CL:0000827,1.75e-40,25;CL:0000815,9.18e-19,2;CL:0000792,9.18e-19,2;CL:0002677,9.18e-19,2;CL:0000838,1.40e-18,52;CL:0000542,3.39e-18,53;CL:0000051,3.39e-18,53;CL:0000624,7.64e-14,6;CL:0000898,7.86e-13,3;CL:0002087,7.79e-09,115;CL:0000738,3.56e-07,136;CL:0002031,5.64e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;8.73e-57;18!CL:0000051;2.44e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.98e-20!15;UBERON:0000179!1.98e-20!15;UBERON:0000463!1.98e-20!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.35e-14;15!UBERON:0000179;3.35e-14;15!UBERON:0000463;3.35e-14;15!UBERON:0002390;8.52e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.80e-14,15;UBERON:0000179,3.80e-14,15;UBERON:0000463,3.80e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7703879310245,0.393010762749165,0.411202997999018,0,8.79990119910694,11.8361951433683,5.84480185223734,0,1.76763544484902,1.10766947291811,0.270803863765016,0,0,0,0,0,1.77943875794473,3.74557159325598,1.04535523804977,0,0.383220493601921,1.71813722741315,0.506039384039006,4.14135038621326,2.60433381542567,0,1.50575119077773,1.27986611154418,6.24653632761729,3.78843603270427,4.10563998460523,1.00803371612366,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,2.29391162142713,0,0.952927101831156,0,1.29694662238543,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GTSCR1 | |||
}} |
Latest revision as of 07:15, 20 September 2015
Short description: | p2@GTSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GTSCR1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -10bp_to_AY262164_5end |
EntrezGene: | GTSCR1 |
HGNC: | 18406 |
UniProt: | Q86UQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.47e-57 | 18 |
alpha-beta T cell | 7.47e-57 | 18 |
immature T cell | 7.47e-57 | 18 |
mature T cell | 7.47e-57 | 18 |
immature alpha-beta T cell | 7.47e-57 | 18 |
CD8-positive, alpha-beta T cell | 1.19e-49 | 11 |
T cell | 1.75e-40 | 25 |
pro-T cell | 1.75e-40 | 25 |
regulatory T cell | 9.18e-19 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.18e-19 | 2 |
naive regulatory T cell | 9.18e-19 | 2 |
lymphoid lineage restricted progenitor cell | 1.40e-18 | 52 |
lymphocyte | 3.39e-18 | 53 |
common lymphoid progenitor | 3.39e-18 | 53 |
CD4-positive, alpha-beta T cell | 7.64e-14 | 6 |
naive T cell | 7.86e-13 | 3 |
nongranular leukocyte | 7.79e-09 | 115 |
leukocyte | 3.56e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 5.64e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.80e-14 | 15 |
haemolymphatic fluid | 3.80e-14 | 15 |
organism substance | 3.80e-14 | 15 |