FFCP PHASE1:Hg19::chr22:38382163..38382187,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5435 | |EntrezGene=5435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9193 | |HGNC=9193 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000333418_5end | |association_with_transcript=-12bp_to_ENST00000333418_5end | ||
|cluster_id=chr22:38382163..38382187,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_POLR2F_5end | |description=CAGE_peak_3_at_POLR2F_5end |
Latest revision as of 07:06, 20 September 2015
Short description: | p3@POLR2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POLR2F_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -12bp_to_ENST00000333418_5end |
EntrezGene: | POLR2F |
HGNC: | 9193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@POLR2F |
---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.64e-09 | 10 |
melanoblast | 6.64e-09 | 10 |
light melanocyte | 9.07e-09 | 3 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 2.86e-75 | 56 |
neural rod | 2.86e-75 | 56 |
future spinal cord | 2.86e-75 | 56 |
neural keel | 2.86e-75 | 56 |
adult organism | 4.46e-68 | 114 |
regional part of nervous system | 6.42e-68 | 53 |
regional part of brain | 6.42e-68 | 53 |
central nervous system | 2.57e-61 | 81 |
brain | 9.45e-59 | 68 |
future brain | 9.45e-59 | 68 |
Showing 1 to 10 of 88 entries