FFCP PHASE1:Hg19::chr19:58694421..58694485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10782 | |EntrezGene=10782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13068 | |HGNC=13068 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GC6 | |UniProt=Q96GC6 | ||
|association_with_transcript=25bp_to_ENST00000326804,ENST00000345813,ENST00000424679,NM_016324,NM_016325,NM_133502,uc002qrq.1,uc002qrr.1,uc002qrs.1,uc010eum.1,uc010yhu.1,uc010yhv.1_5end | |association_with_transcript=25bp_to_ENST00000326804,ENST00000345813,ENST00000424679,NM_016324,NM_016325,NM_133502,uc002qrq.1,uc002qrr.1,uc002qrs.1,uc010eum.1,uc010yhu.1,uc010yhv.1_5end | ||
|cluster_id=chr19:58694421..58694485,+ | |||
|description=CAGE_peak_1_at_ZNF274_5end | |description=CAGE_peak_1_at_ZNF274_5end | ||
|id=chr19:58694421..58694485,+ | |id=chr19:58694421..58694485,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.61e-20!76;CL:0000557!9.31e-20!71;CL:0000839!7.29e-18!70;CL:0002009!8.37e-18!65;CL:0000763!2.67e-17!112;CL:0000049!2.67e-17!112;CL:0002194!9.88e-17!63;CL:0000576!9.88e-17!63;CL:0000040!9.88e-17!63;CL:0000559!9.88e-17!63;CL:0002057!1.64e-16!42;CL:0000860!6.99e-16!45;CL:0000066!3.32e-08!254 | |ontology_enrichment_celltype=CL:0000766!3.61e-20!76;CL:0000557!9.31e-20!71;CL:0000839!7.29e-18!70;CL:0002009!8.37e-18!65;CL:0000763!2.67e-17!112;CL:0000049!2.67e-17!112;CL:0002194!9.88e-17!63;CL:0000576!9.88e-17!63;CL:0000040!9.88e-17!63;CL:0000559!9.88e-17!63;CL:0002057!1.64e-16!42;CL:0000860!6.99e-16!45;CL:0000066!3.32e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.33e-16;33!CL:0002057;4.33e-16;33!CL:0000473;6.88e-14;39!CL:0000234;6.88e-14;39!CL:0000576;1.24e-10;48!CL:0000766;5.63e-10;69!CL:0000763;5.81e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-20,72;CL:0000557,2.49e-20,67;CL:0000839,2.28e-18,66;CL:0002009,2.28e-18,61;CL:0000763,1.60e-17,108;CL:0000049,1.60e-17,108;CL:0000473,2.40e-17,48;CL:0000234,2.40e-17,48;CL:0002194,2.85e-17,59;CL:0000576,2.85e-17,59;CL:0000040,2.85e-17,59;CL:0000559,2.85e-17,59;CL:0000860,1.61e-16,42;CL:0002057,1.61e-16,42;CL:0000066,3.85e-08,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.89e-16!80;UBERON:0001474!2.31e-16!86;UBERON:0004765!8.86e-13!101;UBERON:0001434!8.86e-13!101;UBERON:0002204!7.78e-12!167;UBERON:0002405!8.26e-11!115;UBERON:0002390!4.75e-09!102;UBERON:0003061!4.75e-09!102;UBERON:0003081!6.95e-09!216;UBERON:0000467!7.93e-09!625;UBERON:0000480!1.51e-08!626;UBERON:0000468!3.62e-08!659;UBERON:0002193!6.29e-08!112;UBERON:0000922!8.85e-08!612;UBERON:0000923!1.70e-07!604;UBERON:0005291!1.70e-07!604;UBERON:0006598!1.70e-07!604;UBERON:0002532!1.70e-07!604;UBERON:0002050!2.23e-07!605;UBERON:0005423!2.23e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.61e-17,76;UBERON:0001474,1.18e-16,82;UBERON:0004765,1.09e-15,90;UBERON:0001434,2.21e-12,100;UBERON:0002204,1.27e-11,167;UBERON:0002405,1.01e-10,93;UBERON:0003081,2.14e-09,203;UBERON:0002390,5.00e-09,98;UBERON:0003061,5.00e-09,98;UBERON:0002193,7.09e-08,108;UBERON:0000922,1.38e-07,592;UBERON:0005423,2.01e-07,581;UBERON:0002050,4.72e-07,564;UBERON:0000923,9.57e-07,560;UBERON:0010316,9.57e-07,560;UBERON:0005291,9.57e-07,560;UBERON:0006598,9.57e-07,560;UBERON:0010317,9.57e-07,560;UBERON:0002532,9.57e-07,560 | |||
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| ||
|short_description=p1@ZNF274 | |short_description=p1@ZNF274 | ||
}} | }} |
Latest revision as of 07:03, 20 September 2015
Short description: | p1@ZNF274 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF274_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000326804, ENST00000345813, ENST00000424679, NM_016324, NM_016325, NM_133502, uc002qrq.1, uc002qrr.1, uc002qrs.1, uc010eum.1, uc010yhu.1, uc010yhv.1_5end |
EntrezGene: | ZNF274 |
HGNC: | 13068 |
UniProt: | Q96GC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.06e-20 | 72 |
granulocyte monocyte progenitor cell | 2.49e-20 | 67 |
myeloid lineage restricted progenitor cell | 2.28e-18 | 66 |
macrophage dendritic cell progenitor | 2.28e-18 | 61 |
myeloid cell | 1.60e-17 | 108 |
common myeloid progenitor | 1.60e-17 | 108 |
defensive cell | 2.40e-17 | 48 |
phagocyte | 2.40e-17 | 48 |
monopoietic cell | 2.85e-17 | 59 |
monocyte | 2.85e-17 | 59 |
monoblast | 2.85e-17 | 59 |
promonocyte | 2.85e-17 | 59 |
classical monocyte | 1.61e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-16 | 42 |
epithelial cell | 3.85e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.61e-17 | 76 |
bone element | 1.18e-16 | 82 |
skeletal element | 1.09e-15 | 90 |
skeletal system | 2.21e-12 | 100 |
musculoskeletal system | 1.27e-11 | 167 |
immune system | 1.01e-10 | 93 |
lateral plate mesoderm | 2.14e-09 | 203 |
hematopoietic system | 5.00e-09 | 98 |
blood island | 5.00e-09 | 98 |
hemolymphoid system | 7.09e-08 | 108 |
embryo | 1.38e-07 | 592 |
developing anatomical structure | 2.01e-07 | 581 |
embryonic structure | 4.72e-07 | 564 |
germ layer | 9.57e-07 | 560 |
germ layer / neural crest | 9.57e-07 | 560 |
embryonic tissue | 9.57e-07 | 560 |
presumptive structure | 9.57e-07 | 560 |
germ layer / neural crest derived structure | 9.57e-07 | 560 |
epiblast (generic) | 9.57e-07 | 560 |