FFCP PHASE1:Hg19::chr3:128206762..128206781,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4171 | |||
|TSSclassifier=strong | |||
|UniProt=P23769 | |||
|association_with_transcript=0bp_to_NM_001145662,uc003ekn.3_5end | |||
|cluster_id=chr3:128206762..128206781,- | |||
|description=CAGE_peak_2_at_GATA2_5end | |||
|id=chr3:128206762..128206781,- | |||
|ontology_enrichment_celltype=CL:0000213!5.67e-14!57;CL:0000215!5.67e-14!57;CL:0002139!3.24e-12!24;CL:0000115!7.05e-12!35;CL:0002078!4.65e-11!44;CL:0000071!1.31e-09!18;CL:0002546!1.31e-09!18;CL:0000222!4.34e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.90e-12;24!CL:0000115;1.60e-10;36!CL:0000071;8.62e-10;18!CL:0000213;1.41e-08;58!CL:0000215;1.41e-08;58!CL:0002078;2.69e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.66e-14,58;CL:0000215,2.66e-14,58;CL:0002139,1.96e-12,24;CL:0000115,2.76e-12,36;CL:0002078,5.12e-11,45;CL:0000071,8.95e-10,18;CL:0002546,8.95e-10,18;CL:0000222,9.30e-09,121 | |||
|ontology_enrichment_development_v019=CL:0002546;8.62e-10;18 | |||
|ontology_enrichment_disease=DOID:14566!1.92e-08!239;DOID:162!2.43e-08!235;DOID:8692!1.56e-07!31;DOID:0050687!9.81e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.49e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.22e-08,239;DOID:162,1.25e-08,235;DOID:8692,9.47e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001009!9.17e-12!113;UBERON:0004535!4.21e-11!110;UBERON:0000055!1.55e-10!69;UBERON:0004872!4.42e-10!84;UBERON:0001986!1.31e-09!18;UBERON:0004638!1.31e-09!18;UBERON:0004852!1.31e-09!18;UBERON:0004111!1.43e-09!241;UBERON:0001981!3.16e-09!60;UBERON:0007500!3.16e-09!60;UBERON:0004537!3.16e-09!60;UBERON:0006965!3.16e-09!60;UBERON:0002049!5.94e-09!79;UBERON:0007798!5.94e-09!79;UBERON:0003914!1.04e-08!118;UBERON:0000477!1.18e-08!286;UBERON:0000487!1.95e-08!22;UBERON:0000025!2.30e-08!194;UBERON:0006914!6.83e-08!25;UBERON:0007023!8.01e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.62e-10;18!UBERON:0001986;8.62e-10;18!UBERON:0004852;8.62e-10;18!UBERON:0000487;1.14e-08;22!UBERON:0006914;7.06e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.07e-11,112;UBERON:0004535,1.40e-10,109;UBERON:0000055,1.63e-10,68;UBERON:0004872,4.14e-10,83;UBERON:0004638,8.95e-10,18;UBERON:0001986,8.95e-10,18;UBERON:0004852,8.95e-10,18;UBERON:0007500,3.05e-09,59;UBERON:0001981,3.05e-09,59;UBERON:0004537,3.05e-09,59;UBERON:0006965,3.05e-09,59;UBERON:0004111,3.08e-09,240;UBERON:0000487,1.08e-08,22;UBERON:0003914,1.47e-08,117;UBERON:0002049,1.67e-08,78;UBERON:0007798,1.67e-08,78;UBERON:0000025,5.36e-08,192;UBERON:0007023,7.00e-08,114;UBERON:0006914,7.12e-08,25;UBERON:0003064,5.55e-07,28 | |||
|phase1_expression=3.99692434395225,0.856402095563933,8.88012745804618,16.0117277365009,1.34088328328186,6.97870819280295,0,0,0,4.66894479352867,1.39560233594486,17.0384270261534,13.4521158896511,0,0,1.34465029290355,3.61616716814386,2.19093027116212,4.39139518911456,3.57051068422685,4.89601658986207,6.58254915103984,0,0.547497700291537,0.376627918784408,0,0.0821005894499457,0,29.1089564868189,1.91914699048606,4.02521920621798,0,0,0,0,0,19.9648298747696,1.10799081706375,0.200544447470142,0.434021741431704,0.895661896959697,0.32389366601898,0,0.290796477559129,0,0.242584061187816,1.39457422143411,2.05583944010913,0.619412741790207,2.58923153089935,0.768482119587302,0,1.03423704220986,2.5819387343353,1.35426486594342,0.941211697713023,0.545812300115692,0.224723484445085,0.612167784741805,0.962787081228281,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0.75374599577023,2.08593167368081,1.73751075764093,4.84319602106695,0.736555271975129,0,0,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0,0,56.8336712889811,68.9425532467289,18.1735018494803,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0,0,14.6284119788377,24.1452309493309,9.07824189089065,9.03597880961416,10.0267582127178,12.6016471495917,0.795285947051099,2.91980922181582,0,0.443458794925128,0.614843499851882,24.9515138823143,0,0.370784442784429,0,0,0,0,0,0,31.2056979565727,38.7105567797756,60.4024472797214,70.6634927405012,75.0903990815732,72.6311630721778,54.3386912995707,31.7852613778275,44.4707828358388,41.5053559828191,56.7989337123897,31.171156334459,41.2464877256406,61.0320713374142,57.5200782996049,39.4704799015633,67.5833411604771,84.233387401525,61.3266549863533,56.9559395740877,28.7626737970739,3.9534125230819,0,0.436094052142534,0.496971951695318,6.20489507156441,4.10468460520978,12.333974692199,14.1867352879343,5.04609840128076,35.2271685908026,2.96001058100592,12.4484414159907,21.5537075311501,22.7212045327708,1.51357427644931,0.576175924479999,14.5279287736954,1.24864030732128,7.41613368007784,4.18456305545043,2.23125547423153,0.323745888736263,0.421352420106746,1.83738754129404,0,3.40975077880026,0,0.494533858557114,2.73048408581408,4.31170885089743,1.34668891163253,1.12606667884768,2.77064115484183,1.31693286264251,1.22595118319608,1.05166641234618,11.1163539496821,21.7061459183523,7.901623386287,21.4051220171157,77.1234116936914,34.8317548825923,21.1265242837416,18.9839193458222,41.856530395834,50.0826206528561,31.0493542320261,23.0124746605748,23.7619703523653,22.3656043285467,26.0947934409588,65.6199492241587,1.73934767846967,0,2.29443676311203,1.95157929807353,1.59035721985782,10.1088730296481,4.45742536566093,6.30802127189071,1.09493207722749,0,0.643240938192885,4.14404764057442,0.464367928031979,0,27.9204048094032,25.2877035117153,30.8494118250857,24.1543800283943,30.7210016170293,34.8787810093312,18.6067205261027,21.7805826289134,25.7780595154082,19.9301972748655,42.0725321410337,5.3504621473082,5.88034845542168,0,0,1.18157981336281,0,7.37930631258681,12.8675857723894,0,0,0,0.0925884451585296,23.7840062876537,11.4392826380754,0,0,0.821860859650752,56.3029146268188,76.8555950877174,53.2711626256875,71.908600214294,54.084628211977,0,0,0.148631162288728,0,0,0,0,0,1.15014803749563,85.7234033938942,150.298676860577,185.973319640073,187.500059395467,504.086036671535,0,0,0,6.84289784090821,0,0.300343057843917,0,0.112131084345361,3.05172048183296,0.07333828582095,3.36106460970222,7.15312891703765,4.22651376278,65.1548385632933,102.967362542252,1.02882949704857,2.83698264046557,3.19706614819319,7.57783366388182,1.62786481617433,7.40916303102692,2.60588947434988,6.04166312862328,5.543663110534,3.61727252471503,1.74306691720059,14.3961107302162,0,0,0,0,0,1.42636905040718,0.434343920002738,1.02738161275192,0.895304816199478,0,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,2.31986643833309,0.670065061337395,2.55175500661265,1.49801404789436,0,3.31532410748828,0,1.00034104211935,0,62.3912584592421,72.2637404628505,77.274183366628,66.0677580558902,0,0,3.10419213877515,2.65690239414175,2.39679919104214,8.51459421787212,0.979005787313703,0.343143423810856,1.6541442089831,5.82428342210265,2.24127871387233,23.6439505728082,6.65741758041988,6.04780586659361,1.73675465473144,2.60885354589706,1.68396056659844,7.68834895534206,12.2809739776009,3.86049410744658,8.90508398669946,3.39261326365842,2.30830242907065,5.50251945292521,10.3850885836724,4.06736324609857,8.21844257223031,1.80455823272956,6.53775021444864,29.2776842819747,48.25415952178,55.2033786979176,7.21919380651859,2.46449078734127,0.784349769176855,0,0.422206515571503,84.1627042124635,57.6617660887388,33.6828829119337,157.311797744095,28.1784295045607,16.0540727633553,4.58777291481069,9.97291210714469,2.23874754722178,4.82371728621056,7.58162807972212,25.1321122614061,50.186240792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| |||
|short_description=p2@GATA2 | |||
}} |
Latest revision as of 07:01, 20 September 2015
Short description: | p2@GATA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001145662, uc003ekn.3_5end |
EntrezGene: | GATA2 |
HGNC: | 4171 |
UniProt: | P23769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.66e-14 | 58 |
barrier cell | 2.66e-14 | 58 |
endothelial cell of vascular tree | 1.96e-12 | 24 |
endothelial cell | 2.76e-12 | 36 |
meso-epithelial cell | 5.12e-11 | 45 |
blood vessel endothelial cell | 8.95e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.95e-10 | 18 |
mesodermal cell | 9.30e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 3.07e-11 | 112 |
cardiovascular system | 1.40e-10 | 109 |
vessel | 1.63e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 4.14e-10 | 83 |
blood vessel endothelium | 8.95e-10 | 18 |
endothelium | 8.95e-10 | 18 |
cardiovascular system endothelium | 8.95e-10 | 18 |
epithelial tube open at both ends | 3.05e-09 | 59 |
blood vessel | 3.05e-09 | 59 |
blood vasculature | 3.05e-09 | 59 |
vascular cord | 3.05e-09 | 59 |
anatomical conduit | 3.08e-09 | 240 |
simple squamous epithelium | 1.08e-08 | 22 |
epithelial tube | 1.47e-08 | 117 |
vasculature | 1.67e-08 | 78 |
vascular system | 1.67e-08 | 78 |
tube | 5.36e-08 | 192 |
adult organism | 7.00e-08 | 114 |
squamous epithelium | 7.12e-08 | 25 |
intermediate mesoderm | 5.55e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.22e-08 | 239 |
cancer | 1.25e-08 | 235 |
myeloid leukemia | 9.47e-08 | 31 |