FFCP PHASE1:Hg19::chrX:17393355..17393388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4810 | |EntrezGene=4810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7820 | |HGNC=7820 | ||
|TSSclassifier=strong | |||
|UniProt=Q6T4R5 | |UniProt=Q6T4R5 | ||
|association_with_transcript=-154bp_to_ENST00000380060,NM_198270,uc004cxx.2,uc011mix.1_5end | |association_with_transcript=-154bp_to_ENST00000380060,NM_198270,uc004cxx.2,uc011mix.1_5end | ||
|cluster_id=chrX:17393355..17393388,+ | |||
|description=CAGE_peak_1_at_NHS_5end | |description=CAGE_peak_1_at_NHS_5end | ||
|id=chrX:17393355..17393388,+ | |id=chrX:17393355..17393388,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!3.08e-07!254 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,2.61e-07,253 | ||
|ontology_enrichment_uberon=UBERON:0000991;4.59e-09;21 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.02e-10!106;DOID:0050687!1.71e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.28e-09,106;DOID:0050687,1.40e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.63e-19!365;UBERON:0000481!2.39e-16!347;UBERON:0000468!3.05e-13!659;UBERON:0000062!3.20e-13!511;UBERON:0000033!4.28e-11!123;UBERON:0000153!5.34e-11!129;UBERON:0007811!5.34e-11!129;UBERON:0000467!5.68e-11!625;UBERON:0000480!9.30e-11!626;UBERON:0000477!2.75e-10!286;UBERON:0004121!5.14e-10!169;UBERON:0004111!1.40e-09!241;UBERON:0000922!1.96e-09!612;UBERON:0000483!2.02e-09!309;UBERON:0000119!3.20e-09!312;UBERON:0000924!4.61e-09!173;UBERON:0006601!4.61e-09!173;UBERON:0007023!5.49e-09!115;UBERON:0000064!8.05e-09!219;UBERON:0004119!3.55e-08!169;UBERON:0000925!3.55e-08!169;UBERON:0006595!3.55e-08!169;UBERON:0001048!3.78e-08!168;UBERON:0003075!4.02e-08!86;UBERON:0007284!4.02e-08!86;UBERON:0005156!5.65e-08!59;UBERON:0000990!5.65e-08!59;UBERON:0004176!6.33e-08!22;UBERON:0002050!8.34e-08!605;UBERON:0005423!8.34e-08!605;UBERON:0000991!8.35e-08!21;UBERON:0009196!8.35e-08!21;UBERON:0009117!8.35e-08!21;UBERON:0005564!8.35e-08!21;UBERON:0000923!1.66e-07!604;UBERON:0005291!1.66e-07!604;UBERON:0006598!1.66e-07!604;UBERON:0002532!1.66e-07!604;UBERON:0003133!2.16e-07!48;UBERON:0001007!2.65e-07!155;UBERON:0001555!2.65e-07!155;UBERON:0007026!2.65e-07!155;UBERON:0003102!3.17e-07!95;UBERON:0001017!3.60e-07!82;UBERON:0000025!4.56e-07!194;UBERON:0005743!4.60e-07!86;UBERON:0002346!6.00e-07!90;UBERON:0003886!7.49e-07!63;UBERON:0001049!7.99e-07!57;UBERON:0005068!7.99e-07!57;UBERON:0006241!7.99e-07!57;UBERON:0007135!7.99e-07!57;UBERON:0000464!8.21e-07!104;UBERON:0004458!9.03e-07!49;UBERON:0002553!9.73e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;4.59e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,6.39e-09,22;UBERON:0000991,8.97e-09,21;UBERON:0009196,8.97e-09,21;UBERON:0009117,8.97e-09,21;UBERON:0005564,8.97e-09,21;UBERON:0003133,5.80e-08,48;UBERON:0005156,1.17e-07,59;UBERON:0000990,1.17e-07,59;UBERON:0004111,1.57e-07,240;UBERON:0010314,1.74e-07,132;UBERON:0004121,2.11e-07,171;UBERON:0000924,2.11e-07,171;UBERON:0006601,2.11e-07,171 | |||
|phase1_expression=1.45342703416445,1.92690471501885,0.986680828671798,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,1.56711376919903,0,0,0,0,0.866364470720326,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,1.47745269692145,2.44800829493104,2.19418305034661,3.43483184557268,5.06435372769671,2.63639543149086,0,0,0,0,0,0.464448369948228,2.75826367343678,3.91567694411725,2.21852406100073,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,2.02785126545153,1.5905718941022,0,2.83604451492204,3.54767035940102,3.77689578480442,3.86388272718252,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,2.48485975847659,1.13967460498122,1.72131935057184,4.87622255272983,1.41867352879343,1.12135520028461,1.06748995729705,1.97334038733728,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,1.34503812496621,1.40921398372518,0.323745888736263,0.561803226808994,1.22492502752936,0.61417158655884,3.20309921644873,3.56400857184616,2.22540236350701,0,0,1.34668891163253,1.37630371859161,1.38532057742091,2.63386572528503,3.0648779579902,4.20666564938471,0.226864366320042,4.66413052791041,1.2813443329114,1.05965950579781,4.20127534518163,1.95799805553034,3.34932702059318,1.11670113798954,3.20675031258406,0.487185025805993,6.05841058185875,1.65689817556139,2.26304479546337,3.55009592516614,0.604512589365842,0.847802961552438,1.15956511897978,0.818238361772504,2.58124135850103,3.04934265323988,3.04818467139416,2.90484857173796,3.42081481550722,1.26160425437814,3.28479623168247,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0.784885860501384,0,1.4763109092493,0,0,1.47008711385542,0,0,0.590789906681404,0,0,1.3725424823882,0.98775256867763,0,2.41269533787914,3.33318402570707,0,0,2.88662684050547,1.97081688457631,0.939269553886573,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0.93733833986777,0.671928512795438,1.84307626415102,2.7763142037883,1.16253575405585,1.91691339582606,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0.763976851116555,0,0,0.102827492703324,0,0,0.224262168690721,1.30788020649984,0,0.517086863031111,0,0.845302752556,0.797814349754612,2.08014873822732,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,1.42636905040718,0,0.61642896765115,0.179060963239896,0,0,0,0,3.04913549066956,1.30139853857622,0,0.837581326671744,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,4.99130067673937,5.88815663030634,3.15404830067869,6.32563640960651,0.902838299183157,0,2.0694614258501,0.664225598535437,2.39679919104214,1.21637060255316,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,1.66435439510497,0,0.744323423456331,4.45039722535381,0.841980283299221,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.887808626565635,0.657017248110473,0.519254429183621,0.697262270759755,0.362578348774867,0.40101294060657,1.65745780084613,0.803701137152247,0.182091168006717,2.36023946926963,0,2.38747545023686,6.27479815341484,2.92278449306521,2.00548094896464,0,0,0.863663664408557,1.54227252690289,0.541892875087706,3.01013864312912,2.29388645740534,1.66215201785745,3.58199607555485,0,0,1.28225062558195,0,0.325378394664303,1.13345112812495,0,0,1.72279661398852,2.60024098414608,3.21367859688319,0.386682873168488,0,0.460511024178389,0.413509717453592,0.107420244868274,0.580066775656914,0.340906509664404,0.623224249527161,0.991709492165869,2.11409074101617,9.82617886208298,1.51736671283325,0.929691098594572,3.1481234683064,2.0911118104818,1.54016790088044,0,1.73986598415015,1.11194531462352,3.14874750832381,0,0.316379424718726,0,0.255897791311334,0,1.27281299170375,1.56989728039846,0.179872457583315,0.54907405947211,0.471249609382746,0.808729926293264,1.58510321173008,0.842516912477962,0,1.21856744815642,2.11300293513511,1.09199929126389,0.424216295861138,1.13008116620243,1.10273068709225,1.32687795048244,0.876901770507525,0,0.655894752046633,0.608731130888112,0.6196469961995,2.25356482025793,0.143411352204052,0,1.426684205925,1.06428319221179,1.47775344708365,2.30506425071931,0,0.349934720244983,1.05844323998063,0,0,0.753150406214233,0.43050537267123,1.68471475667626,1.33029046061003,2.52695740227655,0,0,0,0,0,0,0,0,0,0.962479855263359,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,2.4906390476222,0,0,2.27308917445131,0,0.593929361665277,0,0.994147647766298,2.11004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|phase1_expression=1.45342703416445,1.92690471501885,0.986680828671798,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,1.56711376919903,0,0,0,0,0.866364470720326,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,1.47745269692145,2.44800829493104,2.19418305034661,3.43483184557268,5.06435372769671,2.63639543149086,0,0,0,0,0,0.464448369948228,2.75826367343678,3.91567694411725,2.21852406100073,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,2.02785126545153,1.5905718941022,0,2.83604451492204,3.54767035940102,3.77689578480442,3.86388272718252,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,2.48485975847659,1.13967460498122,1.72131935057184,4.87622255272983,1.41867352879343,1.12135520028461,1.06748995729705,1.97334038733728,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,1.34503812496621,1.40921398372518,0.323745888736263,0.561803226808994,1.22492502752936,0.61417158655884,3.20309921644873,3.56400857184616,2.22540236350701,0,0,1.34668891163253,1.37630371859161,1.38532057742091,2.63386572528503,3.0648779579902,4.20666564938471,0.226864366320042,4.66413052791041,1.2813443329114,1.05965950579781,4.20127534518163,1.95799805553034,3.34932702059318,1.11670113798954,3.20675031258406,0.487185025805993,6.05841058185875,1.65689817556139,2.26304479546337,3.55009592516614,0.604512589365842,0.847802961552438,1.15956511897978,0.818238361772504,2.58124135850103,3.04934265323988,3.04818467139416,2.90484857173796,3.42081481550722,1.26160425437814,3.28479623168247,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0.784885860501384,0,1.4763109092493,0,0,1.47008711385542,0,0,0.590789906681404,0,0,1.3725424823882,0.98775256867763,0,2.41269533787914,3.33318402570707,0,0,2.88662684050547,1.97081688457631,0.939269553886573,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0.93733833986777,0.671928512795438,1.84307626415102,2.7763142037883,1.16253575405585,1.91691339582606,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0.763976851116555,0,0,0.102827492703324,0,0,0.224262168690721,1.30788020649984,0,0.517086863031111,0,0.845302752556,0.797814349754612,2.08014873822732,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,1.42636905040718,0,0.61642896765115,0.179060963239896,0,0,0,0,3.04913549066956,1.30139853857622,0,0.837581326671744,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,4.99130067673937,5.88815663030634,3.15404830067869,6.32563640960651,0.902838299183157,0,2.0694614258501,0.664225598535437,2.39679919104214,1.21637060255316,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,1.66435439510497,0,0.744323423456331,4.45039722535381,0.841980283299221,0.256278298511402,0.511707249066704,0.321707842287215,0,0.154209693802656,0.887808626565635,0.657017248110473,0.519254429183621,0.697262270759755,0.362578348774867,0.40101294060657,1.65745780084613,0.803701137152247,0.182091168006717,2.36023946926963,0,2.38747545023686,6.27479815341484,2.92278449306521,2.00548094896464,0,0,0.863663664408557,1.54227252690289,0.541892875087706,3.01013864312912,2.29388645740534,1.66215201785745,3.58199607555485,0,0,1.28225062558195,0,0.325378394664303,1.13345112812495,0,0,1.72279661398852,2.60024098414608,3.21367859688319,0.386682873168488,0,0.460511024178389,0.413509717453592,0.107420244868274,0.580066775656914,0.340906509664404,0.623224249527161,0.991709492165869,2.11409074101617,9.82617886208298,1.51736671283325,0.929691098594572,3.1481234683064,2.0911118104818,1.54016790088044,0,1.73986598415015,1.11194531462352,3.14874750832381,0,0.316379424718726,0,0.255897791311334,0,1.27281299170375,1.56989728039846,0.179872457583315,0.54907405947211,0.471249609382746,0.808729926293264,1.58510321173008,0.842516912477962,0,1.21856744815642,2.11300293513511,1.09199929126389,0.424216295861138,1.13008116620243,1.10273068709225,1.32687795048244,0.876901770507525,0,0.655894752046633,0.608731130888112,0.6196469961995,2.25356482025793,0.143411352204052,0,1.426684205925,1.06428319221179,1.47775344708365,2.30506425071931,0,0.349934720244983,1.05844323998063,0,0,0.753150406214233,0.43050537267123,1.68471475667626,1.33029046061003,2.52695740227655,0,0,0,0,0,0,0,0,0,0.962479855263359,2.94048259177238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,2.4906390476222,0,0,2.27308917445131,0,0.593929361665277,0,0.994147647766298,2.11004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| ||
|short_description=p1@NHS | |short_description=p1@NHS | ||
}} | }} |
Latest revision as of 06:51, 20 September 2015
Short description: | p1@NHS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NHS_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000380060, NM_198270, uc004cxx.2, uc011mix.1_5end |
EntrezGene: | NHS |
HGNC: | 7820 |
UniProt: | Q6T4R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.61e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
external genitalia | 6.39e-09 | 22 |
gonad | 8.97e-09 | 21 |
indifferent external genitalia | 8.97e-09 | 21 |
indifferent gonad | 8.97e-09 | 21 |
gonad primordium | 8.97e-09 | 21 |
reproductive organ | 5.80e-08 | 48 |
reproductive structure | 1.17e-07 | 59 |
reproductive system | 1.17e-07 | 59 |
anatomical conduit | 1.57e-07 | 240 |
structure with developmental contribution from neural crest | 1.74e-07 | 132 |
ectoderm-derived structure | 2.11e-07 | 171 |
ectoderm | 2.11e-07 | 171 |
presumptive ectoderm | 2.11e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.28e-09 | 106 |
cell type cancer | 1.40e-08 | 143 |