FFCP PHASE1:Hg19::chr20:17949081..17949092,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27131 | |EntrezGene=27131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14969 | |HGNC=14969 | ||
|TSSclassifier=strong | |||
|UniProt=Q5QPE5 | |UniProt=Q5QPE5 | ||
|association_with_transcript=8bp_to_ENST00000431277_5end | |association_with_transcript=8bp_to_ENST00000431277_5end | ||
|cluster_id=chr20:17949081..17949092,- | |||
|description=CAGE_peak_4_at_SNX5_5end | |description=CAGE_peak_4_at_SNX5_5end | ||
|id=chr20:17949081..17949092,- | |id=chr20:17949081..17949092,- | ||
|ontology_enrichment_celltype=CL:0000557!2.83e-07!71;CL:0000839!9.81e-07!70 | |ontology_enrichment_celltype=CL:0000557!2.83e-07!71;CL:0000839!9.81e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.07e-11,67;CL:0000839,7.81e-11,66;CL:0000766,4.11e-09,72;CL:0002009,3.36e-08,61;CL:0002194,4.24e-08,59;CL:0000576,4.24e-08,59;CL:0000040,4.24e-08,59;CL:0000559,4.24e-08,59;CL:0000763,8.08e-08,108;CL:0000049,8.08e-08,108;CL:0000097,1.75e-07,5;CL:0002028,1.75e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.65e-08!102;UBERON:0003061!4.65e-08!102;UBERON:0002193!8.89e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-11,98;UBERON:0003061,1.83e-11,98;UBERON:0002371,2.67e-10,76;UBERON:0002193,6.32e-10,108;UBERON:0002405,7.77e-10,93;UBERON:0001474,8.76e-09,82;UBERON:0004765,2.56e-08,90;UBERON:0001434,1.56e-07,100 | |||
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| ||
|short_description=p4@SNX5 | |short_description=p4@SNX5 | ||
}} | }} |
Latest revision as of 06:48, 20 September 2015
Short description: | p4@SNX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000431277_5end |
EntrezGene: | SNX5 |
HGNC: | 14969 |
UniProt: | Q5QPE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.07e-11 | 67 |
myeloid lineage restricted progenitor cell | 7.81e-11 | 66 |
myeloid leukocyte | 4.11e-09 | 72 |
macrophage dendritic cell progenitor | 3.36e-08 | 61 |
monopoietic cell | 4.24e-08 | 59 |
monocyte | 4.24e-08 | 59 |
monoblast | 4.24e-08 | 59 |
promonocyte | 4.24e-08 | 59 |
myeloid cell | 8.08e-08 | 108 |
common myeloid progenitor | 8.08e-08 | 108 |
mast cell | 1.75e-07 | 5 |
basophil mast progenitor cell | 1.75e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-11 | 98 |
blood island | 1.83e-11 | 98 |
bone marrow | 2.67e-10 | 76 |
hemolymphoid system | 6.32e-10 | 108 |
immune system | 7.77e-10 | 93 |
bone element | 8.76e-09 | 82 |
skeletal element | 2.56e-08 | 90 |
skeletal system | 1.56e-07 | 100 |