FFCP PHASE1:Hg19::chr5:132403182..132403195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3308 | |EntrezGene=3308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5237 | |HGNC=5237 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK311483_5end | |association_with_transcript=0bp_to_AK311483_5end | ||
|cluster_id=chr5:132403182..132403195,+ | |||
|description=CAGE_peak_5_at_HSPA4_5end | |description=CAGE_peak_5_at_HSPA4_5end | ||
|id=chr5:132403182..132403195,+ | |id=chr5:132403182..132403195,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.90e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.50e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.92e-08!239;DOID:162!1.78e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:0060072;7.62e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,6.07e-07,4;DOID:154,7.80e-07,2;DOID:4236,7.80e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@HSPA4 | |short_description=p5@HSPA4 | ||
}} | }} |
Latest revision as of 06:47, 20 September 2015
Short description: | p5@HSPA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HSPA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK311483_5end |
EntrezGene: | HSPA4 |
HGNC: | 5237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.50e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 6.07e-07 | 4 |
mixed cell type cancer | 7.80e-07 | 2 |
carcinosarcoma | 7.80e-07 | 2 |