FFCP PHASE1:Hg19::chr2:217537413..217537424,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:217537413..217537424,-
|short_description=p52@IGFBP5
|description=CAGE_peak_52_at_IGFBP5_5end
|association_with_transcript=130bp_to_BC032366_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_BC032366_5end | |||
|cluster_id=chr2:217537413..217537424,- | |||
|coexpression_cluster_id=C4183 | |||
|description=CAGE_peak_52_at_IGFBP5_5end | |||
|id=chr2:217537413..217537424,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;3.56e-38;6!CL:0000098;3.56e-38;6!CL:0002167;3.56e-38;6!CL:0002616;1.07e-15;1!CL:0000511;2.21e-15;1!CL:0002625;2.21e-15;1!CL:0002174;2.21e-15;1!CL:0000216;2.21e-15;1!CL:0000501;2.21e-15;1!CL:0000710;1.02e-11;20!CL:0000075;9.60e-09;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.40e-38,6;CL:0000098,3.40e-38,6;CL:0002167,3.40e-38,6;CL:0002616,1.16e-15,1;CL:0000511,1.34e-15,1;CL:0002625,1.34e-15,1;CL:0000216,1.34e-15,1;CL:0002174,2.06e-15,1;CL:0000501,2.06e-15,1;CL:0000710,1.01e-11,20;CL:0000075,9.51e-09,27;CL:0002077,5.45e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;5.56e-16;1!DOID:3350;1.20e-08;2!DOID:3307;1.44e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.56e-16,1;DOID:3350,1.20e-08,2;DOID:3307,1.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.21e-15;1!UBERON:0001343;2.21e-15;1!UBERON:0004910;2.21e-15;1!UBERON:0004813;2.21e-15;1!UBERON:0005406;1.67e-08;2!UBERON:0004909;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.34e-15,1;UBERON:0001343,1.34e-15,1;UBERON:0004910,1.34e-15,1;UBERON:0005154,1.34e-15,1;UBERON:0005295,1.34e-15,1;UBERON:0004813,1.34e-15,1;UBERON:0005297,1.34e-15,1;UBERON:0005294,1.34e-15,1;UBERON:0010141,1.34e-15,1;UBERON:0005891,1.34e-15,1;UBERON:0005406,1.73e-08,2;UBERON:0004909,1.86e-08,2;UBERON:0004871,5.56e-08,8 | |||
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| ||
|short_description=p52@IGFBP5 | |||
}} | }} |
Latest revision as of 06:46, 20 September 2015
Short description: | p52@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_IGFBP5_5end |
Coexpression cluster: | C4183_hepatic_Olfactory_Ewing_Cardiac_Osteoblast_heart_Fibroblast |
Association with transcript: | 130bp_to_BC032366_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.40e-38 | 6 |
sensory epithelial cell | 3.40e-38 | 6 |
olfactory epithelial cell | 3.40e-38 | 6 |
perirenal adipocyte cell | 1.16e-15 | 1 |
androgen binding protein secreting cell | 1.34e-15 | 1 |
seminiferous tubule epithelial cell | 1.34e-15 | 1 |
Sertoli cell | 1.34e-15 | 1 |
follicular cell of ovary | 2.06e-15 | 1 |
granulosa cell | 2.06e-15 | 1 |
neurecto-epithelial cell | 1.01e-11 | 20 |
columnar/cuboidal epithelial cell | 9.51e-09 | 27 |
ecto-epithelial cell | 5.45e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.34e-15 | 1 |
seminiferous tubule of testis | 1.34e-15 | 1 |
epithelium of male gonad | 1.34e-15 | 1 |
epithelial cord | 1.34e-15 | 1 |
sex cord | 1.34e-15 | 1 |
seminiferous tubule epithelium | 1.34e-15 | 1 |
testis sex cord | 1.34e-15 | 1 |
genital ridge | 1.34e-15 | 1 |
primitive sex cord of indifferent gonad | 1.34e-15 | 1 |
coelomic epithelium | 1.34e-15 | 1 |
perirenal fat | 1.73e-08 | 2 |
epithelium of gonad | 1.86e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.56e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.56e-16 | 1 |
mesenchymal cell neoplasm | 1.20e-08 | 2 |
teratoma | 1.39e-08 | 2 |