FFCP PHASE1:Hg19::chr2:217537413..217537424,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_BC032366_5end | |association_with_transcript=130bp_to_BC032366_5end | ||
|cluster_id=chr2:217537413..217537424,- | |||
|coexpression_cluster_id=C4183 | |coexpression_cluster_id=C4183 | ||
|description=CAGE_peak_52_at_IGFBP5_5end | |description=CAGE_peak_52_at_IGFBP5_5end | ||
|id=chr2:217537413..217537424,- | |id=chr2:217537413..217537424,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000197;3.56e-38;6!CL:0000098;3.56e-38;6!CL:0002167;3.56e-38;6!CL:0002616;1.07e-15;1!CL:0000511;2.21e-15;1!CL:0002625;2.21e-15;1!CL:0002174;2.21e-15;1!CL:0000216;2.21e-15;1!CL:0000501;2.21e-15;1!CL:0000710;1.02e-11;20!CL:0000075;9.60e-09;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.40e-38,6;CL:0000098,3.40e-38,6;CL:0002167,3.40e-38,6;CL:0002616,1.16e-15,1;CL:0000511,1.34e-15,1;CL:0002625,1.34e-15,1;CL:0000216,1.34e-15,1;CL:0002174,2.06e-15,1;CL:0000501,2.06e-15,1;CL:0000710,1.01e-11,20;CL:0000075,9.51e-09,27;CL:0002077,5.45e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;5.56e-16;1!DOID:3350;1.20e-08;2!DOID:3307;1.44e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.56e-16,1;DOID:3350,1.20e-08,2;DOID:3307,1.39e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59 | |ontology_enrichment_uberon=UBERON:0005156!1.01e-07!59;UBERON:0000990!1.01e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.21e-15;1!UBERON:0001343;2.21e-15;1!UBERON:0004910;2.21e-15;1!UBERON:0004813;2.21e-15;1!UBERON:0005406;1.67e-08;2!UBERON:0004909;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.34e-15,1;UBERON:0001343,1.34e-15,1;UBERON:0004910,1.34e-15,1;UBERON:0005154,1.34e-15,1;UBERON:0005295,1.34e-15,1;UBERON:0004813,1.34e-15,1;UBERON:0005297,1.34e-15,1;UBERON:0005294,1.34e-15,1;UBERON:0010141,1.34e-15,1;UBERON:0005891,1.34e-15,1;UBERON:0005406,1.73e-08,2;UBERON:0004909,1.86e-08,2;UBERON:0004871,5.56e-08,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,1.24900292158013,1.57702415033935,7.49705055953364,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0.177561725313127,0,0,0,0,0,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611989305817931,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,16.934094526493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,2.71499800876856,0.864221491201268,0,0,0,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.25458863311266,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,3.8614456457388,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0.281908808191942,0,0,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,1.24900292158013,1.57702415033935,7.49705055953364,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0.177561725313127,0,0,0,0,0,0,0.459257792658427,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611989305817931,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,16.934094526493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,2.71499800876856,0.864221491201268,0,0,0,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.25458863311266,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,3.8614456457388,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p52@IGFBP5 | |short_description=p52@IGFBP5 | ||
}} | }} |
Latest revision as of 06:46, 20 September 2015
Short description: | p52@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_IGFBP5_5end |
Coexpression cluster: | C4183_hepatic_Olfactory_Ewing_Cardiac_Osteoblast_heart_Fibroblast |
Association with transcript: | 130bp_to_BC032366_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.40e-38 | 6 |
sensory epithelial cell | 3.40e-38 | 6 |
olfactory epithelial cell | 3.40e-38 | 6 |
perirenal adipocyte cell | 1.16e-15 | 1 |
androgen binding protein secreting cell | 1.34e-15 | 1 |
seminiferous tubule epithelial cell | 1.34e-15 | 1 |
Sertoli cell | 1.34e-15 | 1 |
follicular cell of ovary | 2.06e-15 | 1 |
granulosa cell | 2.06e-15 | 1 |
neurecto-epithelial cell | 1.01e-11 | 20 |
columnar/cuboidal epithelial cell | 9.51e-09 | 27 |
ecto-epithelial cell | 5.45e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.34e-15 | 1 |
seminiferous tubule of testis | 1.34e-15 | 1 |
epithelium of male gonad | 1.34e-15 | 1 |
epithelial cord | 1.34e-15 | 1 |
sex cord | 1.34e-15 | 1 |
seminiferous tubule epithelium | 1.34e-15 | 1 |
testis sex cord | 1.34e-15 | 1 |
genital ridge | 1.34e-15 | 1 |
primitive sex cord of indifferent gonad | 1.34e-15 | 1 |
coelomic epithelium | 1.34e-15 | 1 |
perirenal fat | 1.73e-08 | 2 |
epithelium of gonad | 1.86e-08 | 2 |
somatic layer of lateral plate mesoderm | 5.56e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.56e-16 | 1 |
mesenchymal cell neoplasm | 1.20e-08 | 2 |
teratoma | 1.39e-08 | 2 |