FFCP PHASE1:Hg19::chr3:128200742..128200751,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2624 | |EntrezGene=2624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4171 | |HGNC=4171 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=169bp_to_ENST00000489987_5end | |association_with_transcript=169bp_to_ENST00000489987_5end | ||
|cluster_id=chr3:128200742..128200751,- | |||
|description=CAGE_peak_16_at_GATA2_5end | |description=CAGE_peak_16_at_GATA2_5end | ||
|id=chr3:128200742..128200751,- | |id=chr3:128200742..128200751,- | ||
|ontology_enrichment_celltype=CL:0002541;4.09e-23;3!CL:0000097;1.60e-14;5!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:0000163;1.12e-08;9 | |ontology_enrichment_celltype=CL:0002274!6.25e-20!5;CL:0000457!6.25e-20!5;CL:0002191!6.25e-20!5;CL:0000097!6.25e-20!5;CL:0000831!6.25e-20!5;CL:0002028!6.25e-20!5;CL:0000163!6.60e-11!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;4.09e-23;3!CL:0000097;1.60e-14;5!CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7!CL:0000163;1.12e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.09e-23,3;CL:0000097,1.60e-14,5;CL:0002028,1.60e-14,5;CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7;CL:0000163,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.73e-08;10!UBERON:0005564;5.73e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3!UBERON:0000473;1.24e-09;8!UBERON:0005631;6.56e-08;10!UBERON:0000158;6.56e-08;10!UBERON:0003135;2.32e-07;11 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.02e-10!115;UBERON:0001873!9.52e-09!2;UBERON:0010122!9.52e-09!2;UBERON:0003135!2.72e-08!11;UBERON:0000473!1.65e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3!UBERON:0000473;1.24e-09;8!UBERON:0005631;6.56e-08;10!UBERON:0000158;6.56e-08;10!UBERON:0003135;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.09e-23,3;UBERON:0003124,9.89e-11,7;UBERON:0000473,1.24e-09,8;UBERON:0003135,2.32e-07,11 | |||
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| ||
|short_description=p16@GATA2 | |short_description=p16@GATA2 | ||
}} | }} |
Latest revision as of 06:45, 20 September 2015
Short description: | p16@GATA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GATA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 169bp_to_ENST00000489987_5end |
EntrezGene: | GATA2 |
HGNC: | 4171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.09e-23 | 3 |
mast cell | 1.60e-14 | 5 |
basophil mast progenitor cell | 1.60e-14 | 5 |
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
endocrine cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.09e-23 | 3 |
chorion | 9.89e-11 | 7 |
testis | 1.24e-09 | 8 |
male reproductive organ | 2.32e-07 | 11 |