FFCP PHASE1:Hg19::chrX:1710540..1710558,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:1710540..1710558,+ to FFCP PHASE1:Hg19::chrX:1710540..1710558,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8227 | |EntrezGene=8227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18783 | |HGNC=18783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000381261_5end | |||
|cluster_id=chrX:1710540..1710558,+ | |||
|coexpression_cluster_id=C4865 | |||
|description=CAGE_peak_2_at_AKAP17A_5end | |||
|id=chrX:1710540..1710558,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.63e-08!70;CL:0000557!3.04e-08!71;CL:0000766!9.12e-08!76;CL:0000163!4.68e-07!9;CL:0002274!8.15e-07!5;CL:0000457!8.15e-07!5;CL:0002191!8.15e-07!5;CL:0000097!8.15e-07!5;CL:0000831!8.15e-07!5;CL:0002028!8.15e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.95e-12;33!CL:0002057;3.95e-12;33!CL:0000473;1.17e-09;39!CL:0000234;1.17e-09;39!CL:0000097;3.31e-09;5!CL:0000163;3.36e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.03e-13,66;CL:0000557,2.27e-13,67;CL:0000766,5.95e-13,72;CL:0002194,4.96e-10,59;CL:0000576,4.96e-10,59;CL:0000040,4.96e-10,59;CL:0000559,4.96e-10,59;CL:0002009,1.81e-09,61;CL:0000860,1.96e-09,42;CL:0002057,1.96e-09,42;CL:0000097,2.82e-09,5;CL:0002028,2.82e-09,5;CL:0000473,1.71e-08,48;CL:0000234,1.71e-08,48;CL:0000163,2.04e-08,9;CL:0000763,3.43e-08,108;CL:0000049,3.43e-08,108;CL:0002031,4.09e-08,120;CL:0000738,2.90e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.59e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!1.24e-09!41;UBERON:0003134!3.54e-08!37;UBERON:0000474!3.54e-08!37;UBERON:0001474!5.91e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.46e-11,82;UBERON:0002371,1.71e-11,76;UBERON:0004765,1.52e-10,90;UBERON:0002405,3.13e-09,93;UBERON:0001434,1.50e-08,100;UBERON:0002390,2.66e-08,98;UBERON:0003061,2.66e-08,98;UBERON:0002193,9.68e-07,108 | |||
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| ||
|short_description=p2@AKAP17A | |||
}} | }} |
Latest revision as of 06:42, 20 September 2015
Short description: | p2@AKAP17A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AKAP17A_5end |
Coexpression cluster: | C4865_Mast_Neutrophils_Dendritic_lymphoma_CD14_CD4_tridermal |
Association with transcript: | 22bp_to_ENST00000381261_5end |
EntrezGene: | AKAP17A |
HGNC: | 18783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.03e-13 | 66 |
granulocyte monocyte progenitor cell | 2.27e-13 | 67 |
myeloid leukocyte | 5.95e-13 | 72 |
monopoietic cell | 4.96e-10 | 59 |
monocyte | 4.96e-10 | 59 |
monoblast | 4.96e-10 | 59 |
promonocyte | 4.96e-10 | 59 |
macrophage dendritic cell progenitor | 1.81e-09 | 61 |
classical monocyte | 1.96e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-09 | 42 |
mast cell | 2.82e-09 | 5 |
basophil mast progenitor cell | 2.82e-09 | 5 |
defensive cell | 1.71e-08 | 48 |
phagocyte | 1.71e-08 | 48 |
endocrine cell | 2.04e-08 | 9 |
myeloid cell | 3.43e-08 | 108 |
common myeloid progenitor | 3.43e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 4.09e-08 | 120 |
leukocyte | 2.90e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.46e-11 | 82 |
bone marrow | 1.71e-11 | 76 |
skeletal element | 1.52e-10 | 90 |
immune system | 3.13e-09 | 93 |
skeletal system | 1.50e-08 | 100 |
hematopoietic system | 2.66e-08 | 98 |
blood island | 2.66e-08 | 98 |
hemolymphoid system | 9.68e-07 | 108 |