FFCP PHASE1:Hg19::chr17:39777082..39777104,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39777082..39777104,-
|short_description=p6@KRT17
|description=CAGE_peak_6_at_KRT17_5end
|association_with_transcript=0bp_to_EF608071_5end
|EntrezGene=387...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3872 | |EntrezGene=3872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6427 | |HGNC=6427 | ||
|TSSclassifier=strong | |||
|UniProt=Q04695 | |UniProt=Q04695 | ||
|association_with_transcript=0bp_to_EF608071_5end | |||
|cluster_id=chr17:39777082..39777104,- | |||
|coexpression_cluster_id=C544 | |||
|description=CAGE_peak_6_at_KRT17_5end | |||
|id=chr17:39777082..39777104,- | |||
|ontology_enrichment_celltype=CL:0002076!6.38e-26!43;CL:0000066!3.01e-24!254;CL:0002368!4.85e-23!13;CL:0000223!1.11e-18!59;CL:0002159!3.94e-15!13;CL:0002202!1.07e-13!9;CL:0002632!1.07e-13!9;CL:0000622!3.29e-13!5;CL:0000154!6.24e-11!6;CL:0000244!9.90e-11!4;CL:0000731!9.90e-11!4;CL:0002251!8.24e-10!21;CL:0002328!2.43e-09!3;CL:0000349!1.14e-08!3;CL:0002577!1.14e-08!3;CL:0000068!1.79e-08!3;CL:0000069!1.79e-08!3;CL:0002166!1.79e-08!3;CL:0000307!1.79e-08!3;CL:0000377!1.79e-08!3;CL:0002623!2.82e-08!3;CL:0000362!3.32e-08!8;CL:0002077!2.24e-07!33;CL:0002150!3.61e-07!3;CL:0000861!3.61e-07!3;CL:0000150!3.95e-07!9;CL:0000240!4.16e-07!6;CL:0000311!4.16e-07!6;CL:0000079!4.16e-07!6;CL:0000237!4.16e-07!6;CL:0000036!4.16e-07!6;CL:0000357!4.16e-07!6;CL:0000114!4.16e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.22e-33;13!CL:0002076;3.04e-25;42!CL:0002159;2.46e-18;14!CL:0002328;5.65e-18;3!CL:0000622;1.36e-17;5!CL:0002577;1.55e-16;3!CL:0002202;2.32e-15;9!CL:0002632;2.32e-15;9!CL:0000154;1.09e-14;6!CL:0000244;8.73e-13;4!CL:0000731;8.73e-13;4!CL:0000317;4.29e-12;2!CL:1000448;4.29e-12;2!CL:0002308;4.29e-12;2!CL:0002140;4.29e-12;2!CL:0000362;5.58e-10;9!CL:0000150;7.74e-10;9!CL:0002231;9.68e-09;3!CL:0000240;1.10e-08;6!CL:0000311;1.10e-08;6!CL:0000079;1.10e-08;6!CL:0000237;1.10e-08;6!CL:0002077;4.93e-08;34!CL:0002166;5.06e-08;3!CL:0000307;5.06e-08;3!CL:0002623;5.06e-08;3!CL:0002252;5.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.46e-33,13;CL:0002076,4.91e-30,42;CL:0000223,8.69e-21,58;CL:0000066,1.01e-18,253;CL:0002159,2.31e-18,14;CL:0002328,4.66e-18,3;CL:0000622,1.98e-17,5;CL:0002577,1.22e-16,3;CL:0002202,1.92e-15,9;CL:0002632,1.92e-15,9;CL:0000154,1.48e-14,6;CL:0000244,5.95e-13,4;CL:0000731,5.95e-13,4;CL:0000317,2.84e-12,2;CL:1000448,2.84e-12,2;CL:0002308,2.84e-12,2;CL:0002140,2.84e-12,2;CL:0000362,5.52e-10,9;CL:0000150,9.46e-10,9;CL:0002077,3.37e-09,34;CL:0002231,1.05e-08,3;CL:0000240,1.71e-08,6;CL:0000311,1.71e-08,6;CL:0000079,1.71e-08,6;CL:0000237,1.71e-08,6;CL:0000036,1.71e-08,6;CL:0000357,1.71e-08,6;CL:0000114,1.71e-08,6;CL:0000068,4.55e-08,3;CL:0000069,4.55e-08,3;CL:0000307,4.55e-08,3;CL:0000377,4.55e-08,3;CL:0002166,5.25e-08,3;CL:0002623,8.94e-08,3;CL:0002321,1.97e-07,250;CL:0002252,5.89e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;5.51e-11;58!CL:0000357;1.10e-08;6!CL:0000114;1.10e-08;6!CL:0000377;5.06e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!1.42e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004815;5.65e-18;3!UBERON:0002031;5.65e-18;3!UBERON:0001987;1.54e-12;4!UBERON:0002419;4.29e-12;2!UBERON:0007771;4.29e-12;2!UBERON:0003297;4.29e-12;2!UBERON:0001821;4.29e-12;2!UBERON:0003487;4.29e-12;2!UBERON:0001820;4.29e-12;2!UBERON:0002185;5.55e-11;5!UBERON:0000365;2.50e-10;5!UBERON:0000065;3.07e-10;44!UBERON:0007196;4.08e-09;15!UBERON:0001558;4.08e-09;15!UBERON:0005910;1.10e-08;6!UBERON:0000485;5.78e-08;7!UBERON:0005181;5.03e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.66e-18,3;UBERON:0002031,4.66e-18,3;UBERON:0004119,2.25e-14,160;UBERON:0000925,2.25e-14,160;UBERON:0006595,2.25e-14,160;UBERON:0001987,1.29e-12,4;UBERON:0004340,1.29e-12,4;UBERON:0002419,2.84e-12,2;UBERON:0007771,2.84e-12,2;UBERON:0003297,2.84e-12,2;UBERON:0001821,2.84e-12,2;UBERON:0003487,2.84e-12,2;UBERON:0001820,2.84e-12,2;UBERON:0005089,2.84e-12,2;UBERON:0005088,2.84e-12,2;UBERON:0001004,1.52e-11,74;UBERON:0002185,4.95e-11,5;UBERON:0000365,1.85e-10,5;UBERON:0000065,2.56e-10,54;UBERON:0007196,3.65e-09,15;UBERON:0001558,3.65e-09,15;UBERON:0005910,8.58e-09,6;UBERON:0003102,8.68e-08,99;UBERON:0003124,2.06e-07,7;UBERON:0005178,3.46e-07,34;UBERON:0002224,3.46e-07,34;UBERON:0005181,5.89e-07,35 | |||
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| ||
|short_description=p6@KRT17 | |||
}} | }} |
Latest revision as of 06:39, 20 September 2015
Short description: | p6@KRT17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KRT17_5end |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | 0bp_to_EF608071_5end |
EntrezGene: | KRT17 |
HGNC: | 6427 |
UniProt: | Q04695 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.66e-18 | 3 |
epithelium of bronchus | 4.66e-18 | 3 |
endoderm-derived structure | 2.25e-14 | 160 |
endoderm | 2.25e-14 | 160 |
presumptive endoderm | 2.25e-14 | 160 |
placenta | 1.29e-12 | 4 |
allantois | 1.29e-12 | 4 |
skin gland | 2.84e-12 | 2 |
epidermis gland | 2.84e-12 | 2 |
gland of integumental system | 2.84e-12 | 2 |
sebaceous gland | 2.84e-12 | 2 |
skin sebaceous gland | 2.84e-12 | 2 |
sweat gland | 2.84e-12 | 2 |
sweat gland placode | 2.84e-12 | 2 |
sebaceous gland placode | 2.84e-12 | 2 |
respiratory system | 1.52e-11 | 74 |
bronchus | 4.95e-11 | 5 |
urothelium | 1.85e-10 | 5 |
respiratory tract | 2.56e-10 | 54 |
tracheobronchial tree | 3.65e-09 | 15 |
lower respiratory tract | 3.65e-09 | 15 |
transitional epithelium | 8.58e-09 | 6 |
surface structure | 8.68e-08 | 99 |
chorion | 2.06e-07 | 7 |
thoracic cavity element | 3.46e-07 | 34 |
thoracic cavity | 3.46e-07 | 34 |
thoracic segment organ | 5.89e-07 | 35 |