FFCP PHASE1:Hg19::chr5:132299210..132299228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27125 | |EntrezGene=27125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17869 | |HGNC=17869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000491831_5end | |association_with_transcript=-4bp_to_ENST00000491831_5end | ||
|cluster_id=chr5:132299210..132299228,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_AFF4_5end | |description=CAGE_peak_3_at_AFF4_5end | ||
|id=chr5:132299210..132299228,- | |id=chr5:132299210..132299228,- | ||
|ontology_enrichment_celltype=CL:0000766!1.03e-29!76;CL:0000557!1.76e-26!71;CL:0002057!9.87e-24!42;CL:0002009!2.70e-23!65;CL:0000839!1.96e-22!70;CL:0002194!3.67e-22!63;CL:0000576!3.67e-22!63;CL:0000040!3.67e-22!63;CL:0000559!3.67e-22!63;CL:0000860!9.72e-21!45;CL:0000738!4.93e-15!140;CL:0000763!1.74e-10!112;CL:0000049!1.74e-10!112;CL:0002031!3.23e-10!124;CL:0002087!2.27e-09!119 | |ontology_enrichment_celltype=CL:0000766!1.03e-29!76;CL:0000557!1.76e-26!71;CL:0002057!9.87e-24!42;CL:0002009!2.70e-23!65;CL:0000839!1.96e-22!70;CL:0002194!3.67e-22!63;CL:0000576!3.67e-22!63;CL:0000040!3.67e-22!63;CL:0000559!3.67e-22!63;CL:0000860!9.72e-21!45;CL:0000738!4.93e-15!140;CL:0000763!1.74e-10!112;CL:0000049!1.74e-10!112;CL:0002031!3.23e-10!124;CL:0002087!2.27e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.37e-20;33!CL:0002057;7.37e-20;33!CL:0000473;1.39e-16;39!CL:0000234;1.39e-16;39!CL:0000576;9.39e-15;48!CL:0000766;1.20e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.05e-32,72;CL:0000557,1.86e-28,67;CL:0002009,3.28e-25,61;CL:0000839,3.65e-24,66;CL:0002194,4.78e-24,59;CL:0000576,4.78e-24,59;CL:0000040,4.78e-24,59;CL:0000559,4.78e-24,59;CL:0000860,9.87e-24,42;CL:0002057,9.87e-24,42;CL:0000473,1.59e-23,48;CL:0000234,1.59e-23,48;CL:0000738,1.06e-15,136;CL:0000763,4.42e-11,108;CL:0000049,4.42e-11,108;CL:0002031,9.40e-11,120;CL:0002087,6.94e-10,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.71e-22!80;UBERON:0001474!3.67e-21!86;UBERON:0004765!2.86e-18!101;UBERON:0001434!2.86e-18!101;UBERON:0002390!5.99e-18!102;UBERON:0003061!5.99e-18!102;UBERON:0002193!3.77e-16!112;UBERON:0002405!1.29e-14!115;UBERON:0000062!1.56e-10!511;UBERON:0002204!1.05e-08!167;UBERON:0000467!1.64e-08!625;UBERON:0000480!1.72e-08!626;UBERON:0007023!9.17e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!5.71e-22!80;UBERON:0001474!3.67e-21!86;UBERON:0004765!2.86e-18!101;UBERON:0001434!2.86e-18!101;UBERON:0002390!5.99e-18!102;UBERON:0003061!5.99e-18!102;UBERON:0002193!3.77e-16!112;UBERON:0002405!1.29e-14!115;UBERON:0000062!1.56e-10!511;UBERON:0002204!1.05e-08!167;UBERON:0000467!1.64e-08!625;UBERON:0000480!1.72e-08!626;UBERON:0007023!9.17e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-23,76;UBERON:0001474,1.60e-22,82;UBERON:0002390,5.79e-19,98;UBERON:0003061,5.79e-19,98;UBERON:0004765,1.18e-18,90;UBERON:0001434,7.23e-18,100;UBERON:0002405,8.89e-18,93;UBERON:0002193,5.25e-17,108;UBERON:0002204,2.67e-08,167;UBERON:0007023,1.02e-07,114;UBERON:0003081,1.67e-07,203 | |||
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| ||
|short_description=p3@AFF4 | |short_description=p3@AFF4 | ||
}} | }} |
Latest revision as of 06:33, 20 September 2015
Short description: | p3@AFF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AFF4_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -4bp_to_ENST00000491831_5end |
EntrezGene: | AFF4 |
HGNC: | 17869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.05e-32 | 72 |
granulocyte monocyte progenitor cell | 1.86e-28 | 67 |
macrophage dendritic cell progenitor | 3.28e-25 | 61 |
myeloid lineage restricted progenitor cell | 3.65e-24 | 66 |
monopoietic cell | 4.78e-24 | 59 |
monocyte | 4.78e-24 | 59 |
monoblast | 4.78e-24 | 59 |
promonocyte | 4.78e-24 | 59 |
classical monocyte | 9.87e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.87e-24 | 42 |
defensive cell | 1.59e-23 | 48 |
phagocyte | 1.59e-23 | 48 |
leukocyte | 1.06e-15 | 136 |
myeloid cell | 4.42e-11 | 108 |
common myeloid progenitor | 4.42e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 9.40e-11 | 120 |
nongranular leukocyte | 6.94e-10 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-23 | 76 |
bone element | 1.60e-22 | 82 |
hematopoietic system | 5.79e-19 | 98 |
blood island | 5.79e-19 | 98 |
skeletal element | 1.18e-18 | 90 |
skeletal system | 7.23e-18 | 100 |
immune system | 8.89e-18 | 93 |
hemolymphoid system | 5.25e-17 | 108 |
musculoskeletal system | 2.67e-08 | 167 |
adult organism | 1.02e-07 | 114 |
lateral plate mesoderm | 1.67e-07 | 203 |