FFCP PHASE1:Hg19::chr6:99849060..99849082,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25957 | |EntrezGene=25957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21222 | |HGNC=21222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF01 | |UniProt=Q8TF01 | ||
|association_with_transcript=184bp_to_AF314185_5end | |association_with_transcript=184bp_to_AF314185_5end | ||
|cluster_id=chr6:99849060..99849082,- | |||
|coexpression_cluster_id=C905 | |coexpression_cluster_id=C905 | ||
|description=CAGE_peak_8_at_PNISR_5end | |description=CAGE_peak_8_at_PNISR_5end | ||
|id=chr6:99849060..99849082,- | |id=chr6:99849060..99849082,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.99e-16!235;DOID:14566!7.24e-15!239;DOID:0050686!3.96e-09!137;DOID:2531!8.48e-08!51;DOID:0060083!8.48e-08!51 | |ontology_enrichment_disease=DOID:162!4.99e-16!235;DOID:14566!7.24e-15!239;DOID:0050686!3.96e-09!137;DOID:2531!8.48e-08!51;DOID:0060083!8.48e-08!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.62e-08!57;UBERON:0005068!1.62e-08!57;UBERON:0006241!1.62e-08!57;UBERON:0007135!1.62e-08!57;UBERON:0002780!2.17e-08!41;UBERON:0001890!2.17e-08!41;UBERON:0006240!2.17e-08!41;UBERON:0002020!4.24e-08!34;UBERON:0003528!4.24e-08!34;UBERON:0003080!8.88e-08!42;UBERON:0001017!3.39e-07!82;UBERON:0002616!4.81e-07!59;UBERON:0000955!5.87e-07!69;UBERON:0006238!5.87e-07!69;UBERON:0002791!9.93e-07!33 | |ontology_enrichment_uberon=UBERON:0001049!1.62e-08!57;UBERON:0005068!1.62e-08!57;UBERON:0006241!1.62e-08!57;UBERON:0007135!1.62e-08!57;UBERON:0002780!2.17e-08!41;UBERON:0001890!2.17e-08!41;UBERON:0006240!2.17e-08!41;UBERON:0002020!4.24e-08!34;UBERON:0003528!4.24e-08!34;UBERON:0003080!8.88e-08!42;UBERON:0001017!3.39e-07!82;UBERON:0002616!4.81e-07!59;UBERON:0000955!5.87e-07!69;UBERON:0006238!5.87e-07!69;UBERON:0002791!9.93e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.93e-09;34!UBERON:0002020;3.93e-09;34!UBERON:0002791;1.70e-08;32!UBERON:0002780;2.46e-08;41!UBERON:0001890;2.46e-08;41!UBERON:0000073;1.06e-07;53!UBERON:0002616;1.06e-07;53!UBERON:0002619;1.11e-07;22!UBERON:0001869;1.53e-07;32!UBERON:0001893;3.70e-07;34!UBERON:0000956;5.53e-07;25!UBERON:0000203;5.53e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.61e-13,56;UBERON:0005068,4.61e-13,56;UBERON:0006241,4.61e-13,56;UBERON:0007135,4.61e-13,56;UBERON:0000073,1.01e-11,53;UBERON:0002616,1.01e-11,53;UBERON:0002780,7.18e-11,41;UBERON:0001890,7.18e-11,41;UBERON:0003080,7.18e-11,41;UBERON:0006240,7.18e-11,41;UBERON:0003528,1.11e-10,34;UBERON:0002020,1.11e-10,34;UBERON:0001017,2.67e-09,81;UBERON:0002791,2.84e-09,32;UBERON:0002346,6.16e-09,86;UBERON:0000955,1.41e-08,68;UBERON:0006238,1.41e-08,68;UBERON:0001016,2.46e-08,89;UBERON:0001893,2.58e-08,34;UBERON:0001869,3.99e-08,32;UBERON:0003075,6.35e-08,82;UBERON:0007284,6.35e-08,82;UBERON:0002619,1.05e-07,22;UBERON:0000956,6.56e-07,25;UBERON:0000203,6.56e-07,25 | |||
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| ||
|short_description=p8@PNISR | |short_description=p8@PNISR | ||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p8@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PNISR_5end |
Coexpression cluster: | C905_cerebellum_occipital_anaplastic_middle_parietal_Neutrophils_olfactory |
Association with transcript: | 184bp_to_AF314185_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | Q8TF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.61e-13 | 56 |
neural rod | 4.61e-13 | 56 |
future spinal cord | 4.61e-13 | 56 |
neural keel | 4.61e-13 | 56 |
regional part of nervous system | 1.01e-11 | 53 |
regional part of brain | 1.01e-11 | 53 |
regional part of forebrain | 7.18e-11 | 41 |
forebrain | 7.18e-11 | 41 |
anterior neural tube | 7.18e-11 | 41 |
future forebrain | 7.18e-11 | 41 |
brain grey matter | 1.11e-10 | 34 |
gray matter | 1.11e-10 | 34 |
central nervous system | 2.67e-09 | 81 |
regional part of telencephalon | 2.84e-09 | 32 |
neurectoderm | 6.16e-09 | 86 |
brain | 1.41e-08 | 68 |
future brain | 1.41e-08 | 68 |
nervous system | 2.46e-08 | 89 |
telencephalon | 2.58e-08 | 34 |
cerebral hemisphere | 3.99e-08 | 32 |
neural plate | 6.35e-08 | 82 |
presumptive neural plate | 6.35e-08 | 82 |
regional part of cerebral cortex | 1.05e-07 | 22 |
cerebral cortex | 6.56e-07 | 25 |
pallium | 6.56e-07 | 25 |