FFCP PHASE1:Hg19::chr1:206944507..206944524,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3586 | |EntrezGene=3586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5962 | |HGNC=5962 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000367099_5end | |association_with_transcript=9bp_to_ENST00000367099_5end | ||
|cluster_id=chr1:206944507..206944524,- | |||
|coexpression_cluster_id=C2558 | |||
|description=CAGE_peak_3_at_IL10_5end | |description=CAGE_peak_3_at_IL10_5end | ||
|id=chr1:206944507..206944524,- | |id=chr1:206944507..206944524,- | ||
|ontology_enrichment_celltype=CL:0002194!1.11e-53!63;CL:0000576!1.11e-53!63;CL:0000040!1.11e-53!63;CL:0000559!1.11e-53!63;CL:0002009!1.73e-51!65;CL:0002057!5.66e-50!42;CL:0000839!1.49e-46!70;CL:0000860!1.15e-45!45;CL:0000557!1.19e-45!71;CL:0000766!1.75e-43!76;CL:0002087!6.78e-28!119;CL:0000763!3.84e-26!112;CL:0000049!3.84e-26!112;CL:0002031!6.48e-24!124;CL:0000738!5.83e-23!140;CL:0000037!4.26e-16!172;CL:0000566!4.26e-16!172;CL:0002032!5.09e-16!165;CL:0000837!5.09e-16!165;CL:0000988!6.98e-15!182 | |ontology_enrichment_celltype=CL:0002194!1.11e-53!63;CL:0000576!1.11e-53!63;CL:0000040!1.11e-53!63;CL:0000559!1.11e-53!63;CL:0002009!1.73e-51!65;CL:0002057!5.66e-50!42;CL:0000839!1.49e-46!70;CL:0000860!1.15e-45!45;CL:0000557!1.19e-45!71;CL:0000766!1.75e-43!76;CL:0002087!6.78e-28!119;CL:0000763!3.84e-26!112;CL:0000049!3.84e-26!112;CL:0002031!6.48e-24!124;CL:0000738!5.83e-23!140;CL:0000037!4.26e-16!172;CL:0000566!4.26e-16!172;CL:0002032!5.09e-16!165;CL:0000837!5.09e-16!165;CL:0000988!6.98e-15!182 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.86e-89;39!CL:0000234;8.86e-89;39!CL:0000860;5.41e-87;33!CL:0002057;5.41e-87;33!CL:0000576;1.26e-52;48!CL:0000766;1.49e-35;69!CL:0000235;8.62e-22;6!CL:0000763;1.35e-18;100!CL:0002087;4.78e-14;104!CL:0002619;6.22e-13;3!CL:0000738;1.03e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.21e-98,48;CL:0000234,1.21e-98,48;CL:0002194,7.68e-92,59;CL:0000576,7.68e-92,59;CL:0000040,7.68e-92,59;CL:0000559,7.68e-92,59;CL:0002009,1.44e-88,61;CL:0000839,3.08e-81,66;CL:0000557,6.69e-80,67;CL:0000860,1.25e-78,42;CL:0002057,1.25e-78,42;CL:0000766,1.40e-77,72;CL:0000763,1.02e-48,108;CL:0000049,1.02e-48,108;CL:0002087,3.01e-45,115;CL:0002031,5.67e-43,120;CL:0000738,7.79e-39,136;CL:0002032,2.64e-31,161;CL:0000837,2.64e-31,161;CL:0000037,1.35e-29,168;CL:0000988,1.34e-27,177;CL:0000235,6.81e-22,6;CL:0002619,6.23e-13,3;CL:0000134,2.16e-10,354;CL:0002320,5.36e-10,361;CL:0000219,1.30e-08,386;CL:0000048,1.59e-07,427;CL:0000723,2.78e-07,433;CL:0000034,5.70e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.10e-58;42!CL:0000049;7.36e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.00e-40!80;UBERON:0002390!1.34e-37!102;UBERON:0003061!1.34e-37!102;UBERON:0001474!4.29e-36!86;UBERON:0002193!2.33e-35!112;UBERON:0002405!1.40e-34!115;UBERON:0004765!2.35e-29!101;UBERON:0001434!2.35e-29!101;UBERON:0007023!2.72e-27!115;UBERON:0000062!1.99e-15!511;UBERON:0003081!1.32e-14!216;UBERON:0002204!4.33e-12!167;UBERON:0001893!5.89e-10!34;UBERON:0001049!6.18e-10!57;UBERON:0005068!6.18e-10!57;UBERON:0006241!6.18e-10!57;UBERON:0007135!6.18e-10!57;UBERON:0000467!2.18e-09!625;UBERON:0002791!2.36e-09!33;UBERON:0000480!2.55e-09!626;UBERON:0002020!8.31e-09!34;UBERON:0003528!8.31e-09!34;UBERON:0000922!9.72e-09!612;UBERON:0000468!1.28e-08!659;UBERON:0001869!1.84e-08!32;UBERON:0002780!2.33e-08!41;UBERON:0001890!2.33e-08!41;UBERON:0006240!2.33e-08!41;UBERON:0000923!2.34e-08!604;UBERON:0005291!2.34e-08!604;UBERON:0006598!2.34e-08!604;UBERON:0002532!2.34e-08!604;UBERON:0002050!2.72e-08!605;UBERON:0005423!2.72e-08!605;UBERON:0003080!4.83e-08!42;UBERON:0003075!2.05e-07!86;UBERON:0007284!2.05e-07!86;UBERON:0002619!4.51e-07!22;UBERON:0001950!7.15e-07!20;UBERON:0002616!8.01e-07!59;UBERON:0002346!9.36e-07!90 | |ontology_enrichment_uberon=UBERON:0002371!4.00e-40!80;UBERON:0002390!1.34e-37!102;UBERON:0003061!1.34e-37!102;UBERON:0001474!4.29e-36!86;UBERON:0002193!2.33e-35!112;UBERON:0002405!1.40e-34!115;UBERON:0004765!2.35e-29!101;UBERON:0001434!2.35e-29!101;UBERON:0007023!2.72e-27!115;UBERON:0000062!1.99e-15!511;UBERON:0003081!1.32e-14!216;UBERON:0002204!4.33e-12!167;UBERON:0001893!5.89e-10!34;UBERON:0001049!6.18e-10!57;UBERON:0005068!6.18e-10!57;UBERON:0006241!6.18e-10!57;UBERON:0007135!6.18e-10!57;UBERON:0000467!2.18e-09!625;UBERON:0002791!2.36e-09!33;UBERON:0000480!2.55e-09!626;UBERON:0002020!8.31e-09!34;UBERON:0003528!8.31e-09!34;UBERON:0000922!9.72e-09!612;UBERON:0000468!1.28e-08!659;UBERON:0001869!1.84e-08!32;UBERON:0002780!2.33e-08!41;UBERON:0001890!2.33e-08!41;UBERON:0006240!2.33e-08!41;UBERON:0000923!2.34e-08!604;UBERON:0005291!2.34e-08!604;UBERON:0006598!2.34e-08!604;UBERON:0002532!2.34e-08!604;UBERON:0002050!2.72e-08!605;UBERON:0005423!2.72e-08!605;UBERON:0003080!4.83e-08!42;UBERON:0003075!2.05e-07!86;UBERON:0007284!2.05e-07!86;UBERON:0002619!4.51e-07!22;UBERON:0001950!7.15e-07!20;UBERON:0002616!8.01e-07!59;UBERON:0002346!9.36e-07!90 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.97e-69,76;UBERON:0002405,2.35e-64,93;UBERON:0001474,1.03e-63,82;UBERON:0002390,1.23e-57,98;UBERON:0003061,1.23e-57,98;UBERON:0004765,2.91e-57,90;UBERON:0002193,4.10e-54,108;UBERON:0001434,1.24e-50,100;UBERON:0002204,3.59e-28,167;UBERON:0003081,1.23e-25,203;UBERON:0000926,6.03e-13,315;UBERON:0004120,6.03e-13,315;UBERON:0006603,6.03e-13,315;UBERON:0002384,3.64e-10,371 | |||
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|short_description=p3@IL10 | |short_description=p3@IL10 | ||
}} | }} |
Latest revision as of 05:52, 20 September 2015
Short description: | p3@IL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL10_5end |
Coexpression cluster: | C2558_CD14_Monocytederived_Macrophage_spleen_dura_lymph_left |
Association with transcript: | 9bp_to_ENST00000367099_5end |
EntrezGene: | IL10 |
HGNC: | 5962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.21e-98 | 48 |
phagocyte | 1.21e-98 | 48 |
monopoietic cell | 7.68e-92 | 59 |
monocyte | 7.68e-92 | 59 |
monoblast | 7.68e-92 | 59 |
promonocyte | 7.68e-92 | 59 |
macrophage dendritic cell progenitor | 1.44e-88 | 61 |
myeloid lineage restricted progenitor cell | 3.08e-81 | 66 |
granulocyte monocyte progenitor cell | 6.69e-80 | 67 |
classical monocyte | 1.25e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-78 | 42 |
myeloid leukocyte | 1.40e-77 | 72 |
myeloid cell | 1.02e-48 | 108 |
common myeloid progenitor | 1.02e-48 | 108 |
nongranular leukocyte | 3.01e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 5.67e-43 | 120 |
leukocyte | 7.79e-39 | 136 |
hematopoietic oligopotent progenitor cell | 2.64e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-31 | 161 |
hematopoietic stem cell | 1.35e-29 | 168 |
hematopoietic cell | 1.34e-27 | 177 |
macrophage | 6.81e-22 | 6 |
adult endothelial progenitor cell | 6.23e-13 | 3 |
mesenchymal cell | 2.16e-10 | 354 |
connective tissue cell | 5.36e-10 | 361 |
motile cell | 1.30e-08 | 386 |
multi fate stem cell | 1.59e-07 | 427 |
somatic stem cell | 2.78e-07 | 433 |
stem cell | 5.70e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.97e-69 | 76 |
immune system | 2.35e-64 | 93 |
bone element | 1.03e-63 | 82 |
hematopoietic system | 1.23e-57 | 98 |
blood island | 1.23e-57 | 98 |
skeletal element | 2.91e-57 | 90 |
hemolymphoid system | 4.10e-54 | 108 |
skeletal system | 1.24e-50 | 100 |
musculoskeletal system | 3.59e-28 | 167 |
lateral plate mesoderm | 1.23e-25 | 203 |
mesoderm | 6.03e-13 | 315 |
mesoderm-derived structure | 6.03e-13 | 315 |
presumptive mesoderm | 6.03e-13 | 315 |
connective tissue | 3.64e-10 | 371 |