FFCP PHASE1:Hg19::chr14:52327421..52327458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |EntrezGene=54331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |HGNC=4404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554840_5end | |association_with_transcript=0bp_to_ENST00000554840_5end | ||
|cluster_id=chr14:52327421..52327458,+ | |||
|coexpression_cluster_id=C468 | |coexpression_cluster_id=C468 | ||
|description=CAGE_peak_3_at_GNG2_5end | |description=CAGE_peak_3_at_GNG2_5end | ||
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|ontology_enrichment_celltype=CL:0000738!5.32e-32!140;CL:0002031!2.64e-25!124;CL:0002057!7.87e-24!42;CL:0002087!4.96e-23!119;CL:0000037!1.11e-22!172;CL:0000566!1.11e-22!172;CL:0002032!1.09e-21!165;CL:0000837!1.09e-21!165;CL:0000766!2.78e-21!76;CL:0000860!4.31e-20!45;CL:0000988!4.75e-20!182;CL:0000048!1.08e-17!430;CL:0000557!5.78e-17!71;CL:0000839!9.47e-17!70;CL:0000723!2.11e-16!436;CL:0000134!2.87e-16!358;CL:0002320!3.45e-16!365;CL:0000034!5.30e-16!444;CL:0002009!5.11e-15!65;CL:0000219!7.41e-15!390;CL:0002194!3.53e-14!63;CL:0000576!3.53e-14!63;CL:0000040!3.53e-14!63;CL:0000559!3.53e-14!63;CL:0000763!1.84e-13!112;CL:0000049!1.84e-13!112;CL:0000791!6.63e-09!18;CL:0000789!6.63e-09!18;CL:0002420!6.63e-09!18;CL:0002419!6.63e-09!18;CL:0000790!6.63e-09!18;CL:0000084!2.55e-08!25;CL:0000827!2.55e-08!25;CL:0000542!3.22e-08!53;CL:0000051!3.22e-08!53;CL:0000838!3.41e-08!52 | |ontology_enrichment_celltype=CL:0000738!5.32e-32!140;CL:0002031!2.64e-25!124;CL:0002057!7.87e-24!42;CL:0002087!4.96e-23!119;CL:0000037!1.11e-22!172;CL:0000566!1.11e-22!172;CL:0002032!1.09e-21!165;CL:0000837!1.09e-21!165;CL:0000766!2.78e-21!76;CL:0000860!4.31e-20!45;CL:0000988!4.75e-20!182;CL:0000048!1.08e-17!430;CL:0000557!5.78e-17!71;CL:0000839!9.47e-17!70;CL:0000723!2.11e-16!436;CL:0000134!2.87e-16!358;CL:0002320!3.45e-16!365;CL:0000034!5.30e-16!444;CL:0002009!5.11e-15!65;CL:0000219!7.41e-15!390;CL:0002194!3.53e-14!63;CL:0000576!3.53e-14!63;CL:0000040!3.53e-14!63;CL:0000559!3.53e-14!63;CL:0000763!1.84e-13!112;CL:0000049!1.84e-13!112;CL:0000791!6.63e-09!18;CL:0000789!6.63e-09!18;CL:0002420!6.63e-09!18;CL:0002419!6.63e-09!18;CL:0000790!6.63e-09!18;CL:0000084!2.55e-08!25;CL:0000827!2.55e-08!25;CL:0000542!3.22e-08!53;CL:0000051!3.22e-08!53;CL:0000838!3.41e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-17;33!CL:0002057;2.00e-17;33!CL:0000576;9.34e-14;48!CL:0000473;2.62e-13;39!CL:0000234;2.62e-13;39!CL:0000766;1.70e-12;69!CL:0002087;9.24e-10;104!CL:0000791;5.37e-09;18!CL:0000789;5.37e-09;18!CL:0002419;5.37e-09;18!CL:0000084;2.98e-08;25!CL:0000738;5.88e-08;136!CL:0000094;9.48e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;2.00e-17;33!CL:0002057;2.00e-17;33!CL:0000576;9.34e-14;48!CL:0000473;2.62e-13;39!CL:0000234;2.62e-13;39!CL:0000766;1.70e-12;69!CL:0002087;9.24e-10;104!CL:0000791;5.37e-09;18!CL:0000789;5.37e-09;18!CL:0002419;5.37e-09;18!CL:0000084;2.98e-08;25!CL:0000738;5.88e-08;136!CL:0000094;9.48e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.64e-35,136;CL:0002031,6.77e-28,120;CL:0002087,1.62e-25,115;CL:0000037,1.48e-24,168;CL:0000766,2.34e-24,72;CL:0000860,4.83e-24,42;CL:0002057,4.83e-24,42;CL:0002032,1.49e-23,161;CL:0000837,1.49e-23,161;CL:0000473,1.88e-22,48;CL:0000234,1.88e-22,48;CL:0000988,8.37e-22,177;CL:0000557,1.09e-19,67;CL:0000839,1.78e-19,66;CL:0000048,6.04e-19,427;CL:0002009,1.16e-17,61;CL:0000723,1.22e-17,433;CL:0000134,2.53e-17,354;CL:0002320,3.12e-17,361;CL:0000034,3.96e-17,441;CL:0002194,9.06e-17,59;CL:0000576,9.06e-17,59;CL:0000040,9.06e-17,59;CL:0000559,9.06e-17,59;CL:0000219,1.36e-15,386;CL:0000763,4.36e-15,108;CL:0000049,4.36e-15,108;CL:0000791,5.65e-09,18;CL:0000789,5.65e-09,18;CL:0002420,5.65e-09,18;CL:0002419,5.65e-09,18;CL:0000790,5.65e-09,18;CL:0000542,2.52e-08,53;CL:0000051,2.52e-08,53;CL:0000838,2.67e-08,52;CL:0000084,2.99e-08,25;CL:0000827,2.99e-08,25;CL:0000094,9.65e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-17;42!CL:0000790;5.37e-09;18 | |ontology_enrichment_development_v019=CL:0002057;1.66e-17;42!CL:0000790;5.37e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.12e-19!102;UBERON:0003061!7.12e-19!102;UBERON:0002193!1.46e-17!112;UBERON:0002384!1.52e-15!375;UBERON:0002371!1.94e-14!80;UBERON:0001474!4.75e-13!86;UBERON:0004765!5.61e-12!101;UBERON:0001434!5.61e-12!101;UBERON:0002619!3.77e-11!22;UBERON:0001950!2.38e-10!20;UBERON:0002204!3.34e-10!167;UBERON:0001049!5.82e-10!57;UBERON:0005068!5.82e-10!57;UBERON:0006241!5.82e-10!57;UBERON:0007135!5.82e-10!57;UBERON:0007023!1.40e-09!115;UBERON:0001017!1.59e-09!82;UBERON:0000956!1.84e-09!25;UBERON:0000203!1.84e-09!25;UBERON:0003080!2.35e-09!42;UBERON:0002405!2.67e-09!115;UBERON:0002780!3.95e-09!41;UBERON:0001890!3.95e-09!41;UBERON:0006240!3.95e-09!41;UBERON:0001869!4.78e-09!32;UBERON:0001893!7.23e-09!34;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0005743!1.41e-08!86;UBERON:0002791!1.92e-08!33;UBERON:0002616!2.40e-08!59;UBERON:0000955!1.15e-07!69;UBERON:0006238!1.15e-07!69;UBERON:0000073!3.36e-07!94;UBERON:0001016!3.36e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!7.12e-19!102;UBERON:0003061!7.12e-19!102;UBERON:0002193!1.46e-17!112;UBERON:0002384!1.52e-15!375;UBERON:0002371!1.94e-14!80;UBERON:0001474!4.75e-13!86;UBERON:0004765!5.61e-12!101;UBERON:0001434!5.61e-12!101;UBERON:0002619!3.77e-11!22;UBERON:0001950!2.38e-10!20;UBERON:0002204!3.34e-10!167;UBERON:0001049!5.82e-10!57;UBERON:0005068!5.82e-10!57;UBERON:0006241!5.82e-10!57;UBERON:0007135!5.82e-10!57;UBERON:0007023!1.40e-09!115;UBERON:0001017!1.59e-09!82;UBERON:0000956!1.84e-09!25;UBERON:0000203!1.84e-09!25;UBERON:0003080!2.35e-09!42;UBERON:0002405!2.67e-09!115;UBERON:0002780!3.95e-09!41;UBERON:0001890!3.95e-09!41;UBERON:0006240!3.95e-09!41;UBERON:0001869!4.78e-09!32;UBERON:0001893!7.23e-09!34;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0005743!1.41e-08!86;UBERON:0002791!1.92e-08!33;UBERON:0002616!2.40e-08!59;UBERON:0000955!1.15e-07!69;UBERON:0006238!1.15e-07!69;UBERON:0000073!3.36e-07!94;UBERON:0001016!3.36e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.97e-11;22!UBERON:0001950;1.89e-10;20!UBERON:0000956;1.71e-09;25!UBERON:0000203;1.71e-09;25!UBERON:0001869;2.54e-08;32!UBERON:0001893;6.87e-08;34!UBERON:0003528;8.60e-08;34!UBERON:0002020;8.60e-08;34!UBERON:0002791;9.30e-08;32!UBERON:0002780;5.53e-07;41!UBERON:0001890;5.53e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.97e-11;22!UBERON:0001950;1.89e-10;20!UBERON:0000956;1.71e-09;25!UBERON:0000203;1.71e-09;25!UBERON:0001869;2.54e-08;32!UBERON:0001893;6.87e-08;34!UBERON:0003528;8.60e-08;34!UBERON:0002020;8.60e-08;34!UBERON:0002791;9.30e-08;32!UBERON:0002780;5.53e-07;41!UBERON:0001890;5.53e-07;41 | ||
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| ||
|short_description=p3@GNG2 | |short_description=p3@GNG2 | ||
}} | }} |
Latest revision as of 05:41, 20 September 2015
Short description: | p3@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNG2_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000554840_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.60e-21 | 98 |
blood island | 2.60e-21 | 98 |
hemolymphoid system | 9.47e-20 | 108 |
bone marrow | 9.90e-17 | 76 |
connective tissue | 1.51e-16 | 371 |
immune system | 4.84e-16 | 93 |
bone element | 3.88e-15 | 82 |
skeletal element | 1.05e-14 | 90 |
skeletal system | 8.73e-14 | 100 |
musculoskeletal system | 1.12e-11 | 167 |
regional part of cerebral cortex | 3.06e-11 | 22 |
neocortex | 1.96e-10 | 20 |
neural tube | 8.12e-10 | 56 |
neural rod | 8.12e-10 | 56 |
future spinal cord | 8.12e-10 | 56 |
neural keel | 8.12e-10 | 56 |
cerebral cortex | 1.55e-09 | 25 |
pallium | 1.55e-09 | 25 |
adult organism | 2.08e-09 | 114 |
central nervous system | 2.50e-09 | 81 |
regional part of nervous system | 2.96e-09 | 53 |
regional part of brain | 2.96e-09 | 53 |
regional part of forebrain | 3.35e-09 | 41 |
forebrain | 3.35e-09 | 41 |
anterior neural tube | 3.35e-09 | 41 |
future forebrain | 3.35e-09 | 41 |
cerebral hemisphere | 4.06e-09 | 32 |
telencephalon | 6.16e-09 | 34 |
brain grey matter | 1.01e-08 | 34 |
gray matter | 1.01e-08 | 34 |
regional part of telencephalon | 1.78e-08 | 32 |
nervous system | 1.46e-07 | 89 |
brain | 1.83e-07 | 68 |
future brain | 1.83e-07 | 68 |