FFCP PHASE1:Hg19::chr17:39661984..39661995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt=P13646,A1A4E9 | |UniProt=P13646,A1A4E9 | ||
|association_with_transcript=-119bp_to_NM_002274,NM_153490,uc002hwu.1,uc002hwv.1,uc002hwx.1,uc010cxo.2_5end | |association_with_transcript=-119bp_to_NM_002274,NM_153490,uc002hwu.1,uc002hwv.1,uc002hwx.1,uc010cxo.2_5end | ||
|cluster_id=chr17:39661984..39661995,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_7_at_KRT13_5end | |description=CAGE_peak_7_at_KRT13_5end | ||
|id=chr17:39661984..39661995,- | |id=chr17:39661984..39661995,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002202;3.90e-07;9!CL:0002632;3.90e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,3.78e-07,9;CL:0002632,3.78e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.44e-16;1!UBERON:0000358;1.66e-15;1!UBERON:0008814;1.86e-08;2!UBERON:0010056;1.86e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!1.72e-09!14;DOID:3151!8.75e-07!1;DOID:3149!8.75e-07!1 | |ontology_enrichment_disease=DOID:1749!1.72e-09!14;DOID:3151!8.75e-07!1;DOID:3149!8.75e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!9.03e-14!10;UBERON:0003343!5.27e-13!4;UBERON:0004785!5.27e-13!4;UBERON:0000341!2.40e-12!2;UBERON:0000166!3.79e-12!21;UBERON:0003127!4.19e-12!2;UBERON:0000344!2.84e-11!12;UBERON:0003729!1.68e-10!5;UBERON:0000161!6.24e-09!35;UBERON:0000165!7.00e-09!28;UBERON:0000930!7.00e-09!28;UBERON:0001723!1.09e-08!3;UBERON:0001033!1.09e-08!3;UBERON:0010056!1.09e-08!3;UBERON:0003126!9.76e-08!7;UBERON:0001005!9.76e-08!7;UBERON:0001004!2.95e-07!72;UBERON:0002372!3.73e-07!1;UBERON:0001961!3.73e-07!1;UBERON:0001744!3.73e-07!1;UBERON:0001735!3.73e-07!1;UBERON:0000997!9.25e-07!1;UBERON:0005056!9.25e-07!1 | |ontology_enrichment_uberon=UBERON:0000974!9.03e-14!10;UBERON:0003343!5.27e-13!4;UBERON:0004785!5.27e-13!4;UBERON:0000341!2.40e-12!2;UBERON:0000166!3.79e-12!21;UBERON:0003127!4.19e-12!2;UBERON:0000344!2.84e-11!12;UBERON:0003729!1.68e-10!5;UBERON:0000161!6.24e-09!35;UBERON:0000165!7.00e-09!28;UBERON:0000930!7.00e-09!28;UBERON:0001723!1.09e-08!3;UBERON:0001033!1.09e-08!3;UBERON:0010056!1.09e-08!3;UBERON:0003126!9.76e-08!7;UBERON:0001005!9.76e-08!7;UBERON:0001004!2.95e-07!72;UBERON:0002372!3.73e-07!1;UBERON:0001961!3.73e-07!1;UBERON:0001744!3.73e-07!1;UBERON:0001735!3.73e-07!1;UBERON:0000997!9.25e-07!1;UBERON:0005056!9.25e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.43e-20;3!UBERON:0001033;4.43e-20;3!UBERON:0002372;1.07e-15;1!UBERON:0001961;1.07e-15;1!UBERON:0001744;1.07e-15;1!UBERON:0001042;1.07e-15;1!UBERON:0001735;1.07e-15;1!UBERON:0005795;1.66e-15;1!UBERON:0000002;1.73e-10;6!UBERON:0001560;1.73e-10;6!UBERON:0000974;2.14e-10;6!UBERON:0000341;1.67e-08;2!UBERON:0006562;1.67e-08;2!UBERON:0000165;2.01e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.43e-20,3;UBERON:0001033,4.43e-20,3;UBERON:0010056,4.43e-20,3;UBERON:0002372,9.99e-16,1;UBERON:0001961,9.99e-16,1;UBERON:0001744,9.99e-16,1;UBERON:0001735,9.99e-16,1;UBERON:0001042,1.54e-13,10;UBERON:0009145,1.54e-13,10;UBERON:0006562,2.30e-12,11;UBERON:0000166,1.17e-10,22;UBERON:0000002,1.65e-10,6;UBERON:0001560,1.65e-10,6;UBERON:0000341,1.73e-08,2;UBERON:0000165,3.82e-08,29;UBERON:0000930,3.82e-08,29;UBERON:0000072,1.53e-07,47;UBERON:0001557,2.18e-07,19 | |||
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|short_description=p7@KRT13 | |short_description=p7@KRT13 | ||
}} | }} |
Latest revision as of 05:40, 20 September 2015
Short description: | p7@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KRT13_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -119bp_to_NM_002274, NM_153490, uc002hwu.1, uc002hwv.1, uc002hwx.1, uc010cxo.2_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | P13646A1A4E9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 3.78e-07 | 9 |
epithelial cell of lower respiratory tract | 3.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.43e-20 | 3 |
gustatory system | 4.43e-20 | 3 |
future tongue | 4.43e-20 | 3 |
tonsil | 9.99e-16 | 1 |
mucosa-associated lymphoid tissue | 9.99e-16 | 1 |
lymphoid tissue | 9.99e-16 | 1 |
tonsillar ring | 9.99e-16 | 1 |
chordate pharynx | 1.54e-13 | 10 |
pharyngeal region of foregut | 1.54e-13 | 10 |
pharynx | 2.30e-12 | 11 |
oral opening | 1.17e-10 | 22 |
uterine cervix | 1.65e-10 | 6 |
neck of organ | 1.65e-10 | 6 |
throat | 1.73e-08 | 2 |
mouth | 3.82e-08 | 29 |
stomodeum | 3.82e-08 | 29 |
segment of respiratory tract | 1.53e-07 | 47 |
upper respiratory tract | 2.18e-07 | 19 |