FFCP PHASE1:Hg19::chr10:98460644..98460661,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:98460644..98460661,-
|short_description=p5@PIK3AP1
|description=CAGE_peak_5_at_PIK3AP1_5end
|association_with_transcript=-9bp_to_ENST00000468783_5end
|En...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118788 | |EntrezGene=118788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30034 | |HGNC=30034 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000468783_5end | |||
|cluster_id=chr10:98460644..98460661,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_5_at_PIK3AP1_5end | |||
|id=chr10:98460644..98460661,- | |||
|ontology_enrichment_celltype=CL:0000945!6.66e-51!24;CL:0000826!6.66e-51!24;CL:0000037!9.34e-36!172;CL:0000566!9.34e-36!172;CL:0002032!1.28e-34!165;CL:0000837!1.28e-34!165;CL:0000236!1.18e-33!14;CL:0000988!4.86e-33!182;CL:0002087!7.11e-31!119;CL:0002031!9.38e-31!124;CL:0000738!1.42e-30!140;CL:0000542!9.11e-24!53;CL:0000051!9.11e-24!53;CL:0000838!4.20e-22!52;CL:0000763!3.11e-13!112;CL:0000049!3.11e-13!112;CL:0002057!2.19e-12!42;CL:0000860!2.65e-11!45;CL:0000839!4.71e-11!70;CL:0000557!7.90e-11!71;CL:0000134!3.32e-10!358;CL:0000766!8.47e-10!76;CL:0002320!9.19e-10!365;CL:0002274!1.82e-08!5;CL:0000457!1.82e-08!5;CL:0002191!1.82e-08!5;CL:0000097!1.82e-08!5;CL:0000831!1.82e-08!5;CL:0002028!1.82e-08!5;CL:0000219!3.25e-08!390;CL:0002194!6.59e-08!63;CL:0000576!6.59e-08!63;CL:0000040!6.59e-08!63;CL:0000559!6.59e-08!63;CL:0002009!1.49e-07!65;CL:0002393!2.89e-07!9;CL:0002397!2.89e-07!9;CL:0000785!2.93e-07!2;CL:0000955!2.93e-07!2;CL:0000818!2.93e-07!2;CL:0000954!2.93e-07!2;CL:0000816!2.93e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.78e-112;24!CL:0000236;1.54e-61;13!CL:0000542;2.07e-32;53!CL:0000946;9.79e-09;1!CL:0000786;9.79e-09;1!CL:0002087;2.31e-08;104!CL:0000785;4.40e-08;1!CL:0000819;4.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.12e-112,24;CL:0000826,2.12e-112,24;CL:0000236,1.08e-68,14;CL:0000838,6.86e-50,52;CL:0000542,7.06e-49,53;CL:0000051,7.06e-49,53;CL:0002087,1.62e-22,115;CL:0002031,2.03e-21,120;CL:0002032,1.69e-18,161;CL:0000837,1.69e-18,161;CL:0000738,1.90e-18,136;CL:0000037,1.49e-17,168;CL:0000988,1.90e-16,177;CL:0000785,2.53e-15,2;CL:0000955,2.53e-15,2;CL:0000818,2.53e-15,2;CL:0000954,2.53e-15,2;CL:0000816,2.53e-15,2;CL:0000817,1.62e-10,3;CL:0000946,9.79e-09,1;CL:0000786,9.79e-09,1;CL:0000980,9.79e-09,1;CL:0000819,2.69e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.07e-32;53!CL:0000954;4.16e-15;2!UBERON:0004872;1.85e-09;7!UBERON:0001045;4.40e-08;1 | |||
|ontology_enrichment_disease=DOID:2531!9.13e-09!51;DOID:0060083!9.13e-09!51;DOID:0060058!1.94e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.49e-17;10!DOID:630;1.51e-08;1!DOID:0050177;1.51e-08;1!DOID:0050427;1.51e-08;1!DOID:0060073;4.40e-08;1!DOID:8675;4.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.03e-17,10;DOID:630,1.41e-08,1;DOID:0050177,1.41e-08,1;DOID:0050427,1.41e-08,1;DOID:0060073,2.69e-08,1;DOID:8675,2.69e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.00e-13!102;UBERON:0003061!9.00e-13!102;UBERON:0002193!3.93e-12!112;UBERON:0002405!1.26e-10!115;UBERON:0004177!1.51e-09!7;UBERON:0002106!2.42e-09!3;UBERON:0004854!2.42e-09!3;UBERON:0009034!2.42e-09!3;UBERON:0002095!2.42e-09!3;UBERON:0004782!2.42e-09!3;UBERON:0003281!2.42e-09!3;UBERON:0009664!2.42e-09!3;UBERON:0002296!2.42e-09!3;UBERON:0005602!2.42e-09!3;UBERON:0001179!2.42e-09!3;UBERON:0006293!2.42e-09!3;UBERON:0002384!3.67e-09!375;UBERON:0002371!4.53e-09!80;UBERON:0001474!4.14e-08!86;UBERON:0004765!5.51e-07!101;UBERON:0001434!5.51e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.65e-10;3!UBERON:0002372;4.40e-08;1!UBERON:0001154;4.40e-08;1!UBERON:0001153;4.40e-08;1!UBERON:0009854;4.40e-08;1!UBERON:0001961;4.40e-08;1!UBERON:0001744;4.40e-08;1!UBERON:0001042;4.40e-08;1!UBERON:0001735;4.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.75e-10,3;UBERON:0004854,3.75e-10,3;UBERON:0009034,3.75e-10,3;UBERON:0002095,3.75e-10,3;UBERON:0004782,3.75e-10,3;UBERON:0003281,3.75e-10,3;UBERON:0009664,3.75e-10,3;UBERON:0002296,3.75e-10,3;UBERON:0005602,3.75e-10,3;UBERON:0001179,3.75e-10,3;UBERON:0006293,3.75e-10,3;UBERON:0002372,5.07e-08,1;UBERON:0001961,5.07e-08,1;UBERON:0001744,5.07e-08,1;UBERON:0001735,5.07e-08,1;UBERON:0001154,6.24e-08,1;UBERON:0001153,6.24e-08,1;UBERON:0001045,6.24e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5450499932173,9.76997014454354,12.278881884934,0,0,0,0,0,0,1.70427841276664,5.2602616020346,0,0.553995408531877,1.20326668482085,0.651032612147555,0,0,0,0,0.377875943688809,0,0,0.822335776043652,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,5.27988733383968,1.09227722252426,1.77901850772711,1.28019066769952,3.60356388332411,1.72425731986345,0.661044872784862,2.86216126360609,1.70763890732835,2.34894875748376,1.52909291250092,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0.649243880549111,0,0.456469358066384,0,0,0,1.605880751037,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,4.67722260752064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5116841023204,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,1.82454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,2.31405936923702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1829261750188,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1366745813588,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03382309777839,0.386747327841463,9.59435096879318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,1.27968900727716,0.215166616178029,0,0,0,0,0,0,0,0,0,1.81146414231924,5.44966436915496 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5450499932173,9.76997014454354,12.278881884934,0,0,0,0,0,0,1.70427841276664,5.2602616020346,0,0.553995408531877,1.20326668482085,0.651032612147555,0,0,0,0,0.377875943688809,0,0,0.822335776043652,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,5.27988733383968,1.09227722252426,1.77901850772711,1.28019066769952,3.60356388332411,1.72425731986345,0.661044872784862,2.86216126360609,1.70763890732835,2.34894875748376,1.52909291250092,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0.649243880549111,0,0.456469358066384,0,0,0,1.605880751037,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,4.67722260752064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5116841023204,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,1.82454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,2.31405936923702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1829261750188,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1366745813588,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03382309777839,0.386747327841463,9.59435096879318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0,0,1.27968900727716,0.215166616178029,0,0,0,0,0,0,0,0,0,1.81146414231924,5.44966436915496 | ||
|short_description=p5@PIK3AP1 | |||
}} | }} |
Latest revision as of 05:40, 20 September 2015
Short description: | p5@PIK3AP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PIK3AP1_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -9bp_to_ENST00000468783_5end |
EntrezGene: | PIK3AP1 |
HGNC: | 30034 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.12e-112 | 24 |
pro-B cell | 2.12e-112 | 24 |
B cell | 1.08e-68 | 14 |
lymphoid lineage restricted progenitor cell | 6.86e-50 | 52 |
lymphocyte | 7.06e-49 | 53 |
common lymphoid progenitor | 7.06e-49 | 53 |
nongranular leukocyte | 1.62e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.03e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.69e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-18 | 161 |
leukocyte | 1.90e-18 | 136 |
hematopoietic stem cell | 1.49e-17 | 168 |
hematopoietic cell | 1.90e-16 | 177 |
mature B cell | 2.53e-15 | 2 |
pre-B-II cell | 2.53e-15 | 2 |
transitional stage B cell | 2.53e-15 | 2 |
small pre-B-II cell | 2.53e-15 | 2 |
immature B cell | 2.53e-15 | 2 |
precursor B cell | 1.62e-10 | 3 |
antibody secreting cell | 9.79e-09 | 1 |
plasma cell | 9.79e-09 | 1 |
plasmablast | 9.79e-09 | 1 |
B-1 B cell | 2.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.75e-10 | 3 |
gastrointestinal system mesentery | 3.75e-10 | 3 |
stomach region | 3.75e-10 | 3 |
mesentery | 3.75e-10 | 3 |
gastrointestinal system serosa | 3.75e-10 | 3 |
mesentery of stomach | 3.75e-10 | 3 |
gut mesentery | 3.75e-10 | 3 |
dorsal mesentery | 3.75e-10 | 3 |
dorsal mesogastrium | 3.75e-10 | 3 |
peritoneal cavity | 3.75e-10 | 3 |
spleen primordium | 3.75e-10 | 3 |
tonsil | 5.07e-08 | 1 |
mucosa-associated lymphoid tissue | 5.07e-08 | 1 |
lymphoid tissue | 5.07e-08 | 1 |
tonsillar ring | 5.07e-08 | 1 |
vermiform appendix | 6.24e-08 | 1 |
caecum | 6.24e-08 | 1 |
midgut | 6.24e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.03e-17 | 10 |
genetic disease | 1.41e-08 | 1 |
monogenic disease | 1.41e-08 | 1 |
xeroderma pigmentosum | 1.41e-08 | 1 |
lymphatic system cancer | 2.69e-08 | 1 |
lymphosarcoma | 2.69e-08 | 1 |