FFCP PHASE1:Hg19::chr22:38004473..38004508,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26088 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17842 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJY5,Q8NCS6,Q86YA9 | |||
|association_with_transcript=0bp_to_ENST00000343632,ENST00000414350,NM_001001560,NM_001001561,NM_001172687,NM_013365,uc003atb.2,uc003atc.2,uc003atd.2,uc003ate.2_5end | |||
|cluster_id=chr22:38004473..38004508,+ | |||
|description=CAGE_peak_3_at_GGA1_5end | |||
|id=chr22:38004473..38004508,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.16e-08!86;UBERON:0000073!2.56e-08!94;UBERON:0001016!2.56e-08!94;UBERON:0007023!3.74e-08!115;UBERON:0000924!2.91e-07!173;UBERON:0006601!2.91e-07!173;UBERON:0001017!4.99e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.01e-08,114;UBERON:0011216,1.53e-07,223;UBERON:0004121,4.65e-07,171;UBERON:0000924,4.65e-07,171;UBERON:0006601,4.65e-07,171;UBERON:0001016,6.28e-07,89;UBERON:0001017,6.61e-07,81 | |||
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| |||
|short_description=p3@GGA1 | |||
}} |
Latest revision as of 05:34, 20 September 2015
Short description: | p3@GGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GGA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343632, ENST00000414350, NM_001001560, NM_001001561, NM_001172687, NM_013365, uc003atb.2, uc003atc.2, uc003atd.2, uc003ate.2_5end |
EntrezGene: | GGA1 |
HGNC: | 17842 |
UniProt: | Q9UJY5Q8NCS6Q86YA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.01e-08 | 114 |
organ system subdivision | 1.53e-07 | 223 |
ectoderm-derived structure | 4.65e-07 | 171 |
ectoderm | 4.65e-07 | 171 |
presumptive ectoderm | 4.65e-07 | 171 |
nervous system | 6.28e-07 | 89 |
central nervous system | 6.61e-07 | 81 |