FFCP PHASE1:Hg19::chr4:103789894..103789911,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493856 | |EntrezGene=493856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24212 | |HGNC=24212 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5K1 | |UniProt=Q8N5K1 | ||
|association_with_transcript=-223bp_to_ENST00000273986,NM_001008388,uc003hwt.3_5end | |association_with_transcript=-223bp_to_ENST00000273986,NM_001008388,uc003hwt.3_5end | ||
|cluster_id=chr4:103789894..103789911,+ | |||
|description=CAGE_peak_6_at_CISD2_5end | |description=CAGE_peak_6_at_CISD2_5end | ||
|id=chr4:103789894..103789911,+ | |id=chr4:103789894..103789911,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.21e-16!182;CL:0000037!1.17e-14!172;CL:0000566!1.17e-14!172;CL:0000542!3.29e-13!53;CL:0000051!3.29e-13!53;CL:0002032!6.87e-13!165;CL:0000837!6.87e-13!165;CL:0000838!6.92e-13!52;CL:0000738!4.97e-12!140;CL:0002087!9.14e-12!119;CL:0002031!2.43e-11!124;CL:0000084!6.98e-08!25;CL:0000827!6.98e-08!25;CL:0000791!1.64e-07!18;CL:0000789!1.64e-07!18;CL:0002420!1.64e-07!18;CL:0002419!1.64e-07!18;CL:0000790!1.64e-07!18 | |ontology_enrichment_celltype=CL:0000988!5.21e-16!182;CL:0000037!1.17e-14!172;CL:0000566!1.17e-14!172;CL:0000542!3.29e-13!53;CL:0000051!3.29e-13!53;CL:0002032!6.87e-13!165;CL:0000837!6.87e-13!165;CL:0000838!6.92e-13!52;CL:0000738!4.97e-12!140;CL:0002087!9.14e-12!119;CL:0002031!2.43e-11!124;CL:0000084!6.98e-08!25;CL:0000827!6.98e-08!25;CL:0000791!1.64e-07!18;CL:0000789!1.64e-07!18;CL:0002420!1.64e-07!18;CL:0002419!1.64e-07!18;CL:0000790!1.64e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.13e-20;3!CL:0000624;4.90e-18;6!CL:0000791;2.16e-17;18!CL:0000789;2.16e-17;18!CL:0002419;2.16e-17;18!CL:0000084;5.50e-16;25!CL:0000542;2.74e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.08e-25,52;CL:0000542,3.76e-25,53;CL:0000051,3.76e-25,53;CL:0000623,6.49e-21,3;CL:0000825,6.49e-21,3;CL:0000624,4.71e-18,6;CL:0000791,2.11e-17,18;CL:0000789,2.11e-17,18;CL:0002420,2.11e-17,18;CL:0002419,2.11e-17,18;CL:0000790,2.11e-17,18;CL:0000084,6.11e-16,25;CL:0000827,6.11e-16,25;CL:0000988,5.72e-15,177;CL:0000738,1.83e-13,136;CL:0002087,5.57e-13,115;CL:0000037,6.44e-13,168;CL:0002031,2.79e-12,120;CL:0002032,8.48e-11,161;CL:0000837,8.48e-11,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.16e-17;18!CL:0000051;2.74e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.97e-07;15!UBERON:0000179;3.97e-07;15!UBERON:0000463;3.97e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.11e-07,15;UBERON:0000179,4.11e-07,15;UBERON:0000463,4.11e-07,15 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0.136874425072884,0,0.229240217243854,0.246301768349837,0.157421562627358,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0.0774672005803016,0.426507697462265,0.587200878669695,0,0.802177789880567,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0.329851300186716,1.39624560335142,0.852449501065388,0,0,0.622822248995575,0.75374599577023,0,0.434377689410233,0,0,0.632924774881769,0,0.637812899895131,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0.800791974072025,0,0,0,1.70763890732835,2.93618594685469,2.29363936875137,1.32171328579026,1.12101712596307,0.263384084775077,2.16380747125216,2.35806457649499,3.08402248499264,0.668745981562712,1.95553359980154,1.89379122293893,0,0.668462741311041,0.883817722424512,0.886135578334485,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,1.63115219478266,1.07016331235885,1.04535523804977,0,0.383220493601921,0.34362744548263,0.759059076058509,0.318565414324097,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,2.21767417547206,2.40696176205157,2.75166367377318,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,2.95546140302891,1.94064817373566,2.95188983443421,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,1.72571360654893,0.640365346820666,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.355709216742071,0.637705090915289,0.199579371432817,0,0.635020748171649,0.649243880549111,0.280797178113459,0.456469358066384,0,2.50634477090067,0.338583555603207,0,0,0.425846237690326,0,0,0.223676107892416,0.333698283423817,0,0,0,1.08182271390393,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0,0,0.341826167541004,0,0.0897576444097721,0.217294743844016,0,0.0915975934018623,0,2.04386596391473,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0.476809736941136,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,2.37216902944498,1.11207545051853,0.730953646538188,0,0,0,0.364909578431332,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0,0,0,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0.226624183040251,0.293104467356165,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,1.58330377895165,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0.38582807654183,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.169732529954025,0.637724760305049,0.495743057036009,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0.0999411559249289,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.387533459016037,0.434523000071005,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0.136874425072884,0,0.229240217243854,0.246301768349837,0.157421562627358,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0.0774672005803016,0.426507697462265,0.587200878669695,0,0.802177789880567,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0.329851300186716,1.39624560335142,0.852449501065388,0,0,0.622822248995575,0.75374599577023,0,0.434377689410233,0,0,0.632924774881769,0,0.637812899895131,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0.800791974072025,0,0,0,1.70763890732835,2.93618594685469,2.29363936875137,1.32171328579026,1.12101712596307,0.263384084775077,2.16380747125216,2.35806457649499,3.08402248499264,0.668745981562712,1.95553359980154,1.89379122293893,0,0.668462741311041,0.883817722424512,0.886135578334485,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,1.63115219478266,1.07016331235885,1.04535523804977,0,0.383220493601921,0.34362744548263,0.759059076058509,0.318565414324097,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,2.21767417547206,2.40696176205157,2.75166367377318,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,1.7658523976586,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,2.95546140302891,1.94064817373566,2.95188983443421,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,1.72571360654893,0.640365346820666,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.355709216742071,0.637705090915289,0.199579371432817,0,0.635020748171649,0.649243880549111,0.280797178113459,0.456469358066384,0,2.50634477090067,0.338583555603207,0,0,0.425846237690326,0,0,0.223676107892416,0.333698283423817,0,0,0,1.08182271390393,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0.211125408127993,0,0,0,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0,0,0.341826167541004,0,0.0897576444097721,0.217294743844016,0,0.0915975934018623,0,2.04386596391473,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0.476809736941136,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0,0,2.37216902944498,1.11207545051853,0.730953646538188,0,0,0,0.364909578431332,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0,0,0,0,1.349843349309,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0.226624183040251,0.293104467356165,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,1.58330377895165,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0.521988583930423,0,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0.38582807654183,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0.169732529954025,0.637724760305049,0.495743057036009,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0,0.0634158101939068,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.203909198930495,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0.0999411559249289,0,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.275684698604535,0.250707539292375,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.387533459016037,0.434523000071005,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p6@CISD2 | |short_description=p6@CISD2 | ||
}} | }} |
Latest revision as of 05:15, 20 September 2015
Short description: | p6@CISD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CISD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -223bp_to_ENST00000273986, NM_001008388, uc003hwt.3_5end |
EntrezGene: | CISD2 |
HGNC: | 24212 |
UniProt: | Q8N5K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.08e-25 | 52 |
lymphocyte | 3.76e-25 | 53 |
common lymphoid progenitor | 3.76e-25 | 53 |
natural killer cell | 6.49e-21 | 3 |
pro-NK cell | 6.49e-21 | 3 |
CD4-positive, alpha-beta T cell | 4.71e-18 | 6 |
mature alpha-beta T cell | 2.11e-17 | 18 |
alpha-beta T cell | 2.11e-17 | 18 |
immature T cell | 2.11e-17 | 18 |
mature T cell | 2.11e-17 | 18 |
immature alpha-beta T cell | 2.11e-17 | 18 |
T cell | 6.11e-16 | 25 |
pro-T cell | 6.11e-16 | 25 |
hematopoietic cell | 5.72e-15 | 177 |
leukocyte | 1.83e-13 | 136 |
nongranular leukocyte | 5.57e-13 | 115 |
hematopoietic stem cell | 6.44e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 2.79e-12 | 120 |
hematopoietic oligopotent progenitor cell | 8.48e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.48e-11 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 4.11e-07 | 15 |
haemolymphatic fluid | 4.11e-07 | 15 |
organism substance | 4.11e-07 | 15 |