FFCP PHASE1:Hg19::chr1:206756636..206756643,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83593 | |EntrezGene=83593 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17609 | |HGNC=17609 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000491368_5end | |association_with_transcript=32bp_to_ENST00000491368_5end | ||
|cluster_id=chr1:206756636..206756643,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_23_at_RASSF5_5end | |description=CAGE_peak_23_at_RASSF5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.32e-53!42;CL:0000860!1.15e-49!45;CL:0000557!3.49e-48!71;CL:0002009!1.83e-45!65;CL:0000839!1.25e-41!70;CL:0000766!6.24e-41!76;CL:0000738!9.19e-40!140;CL:0002194!1.42e-39!63;CL:0000576!1.42e-39!63;CL:0000040!1.42e-39!63;CL:0000559!1.42e-39!63;CL:0002031!3.53e-38!124;CL:0002087!1.27e-34!119;CL:0000037!5.83e-31!172;CL:0000566!5.83e-31!172;CL:0002032!1.30e-30!165;CL:0000837!1.30e-30!165;CL:0000763!1.77e-30!112;CL:0000049!1.77e-30!112;CL:0000988!7.70e-29!182;CL:0000875!5.04e-14!3;CL:0002396!5.04e-14!3;CL:0000134!1.01e-11!358;CL:0002320!2.41e-11!365;CL:0001014!3.94e-11!2;CL:0001016!3.94e-11!2;CL:0000219!5.27e-10!390;CL:0000048!2.11e-08!430;CL:0002393!3.20e-08!9;CL:0002397!3.20e-08!9;CL:0000723!3.57e-08!436;CL:0000034!7.02e-08!444;CL:0000840!1.01e-07!5;CL:0001029!1.01e-07!5 | |ontology_enrichment_celltype=CL:0002057!1.32e-53!42;CL:0000860!1.15e-49!45;CL:0000557!3.49e-48!71;CL:0002009!1.83e-45!65;CL:0000839!1.25e-41!70;CL:0000766!6.24e-41!76;CL:0000738!9.19e-40!140;CL:0002194!1.42e-39!63;CL:0000576!1.42e-39!63;CL:0000040!1.42e-39!63;CL:0000559!1.42e-39!63;CL:0002031!3.53e-38!124;CL:0002087!1.27e-34!119;CL:0000037!5.83e-31!172;CL:0000566!5.83e-31!172;CL:0002032!1.30e-30!165;CL:0000837!1.30e-30!165;CL:0000763!1.77e-30!112;CL:0000049!1.77e-30!112;CL:0000988!7.70e-29!182;CL:0000875!5.04e-14!3;CL:0002396!5.04e-14!3;CL:0000134!1.01e-11!358;CL:0002320!2.41e-11!365;CL:0001014!3.94e-11!2;CL:0001016!3.94e-11!2;CL:0000219!5.27e-10!390;CL:0000048!2.11e-08!430;CL:0002393!3.20e-08!9;CL:0002397!3.20e-08!9;CL:0000723!3.57e-08!436;CL:0000034!7.02e-08!444;CL:0000840!1.01e-07!5;CL:0001029!1.01e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.03e-45;2!CL:0001016;2.03e-45;2!CL:0000453;7.24e-19;5!CL:0000840;6.71e-16;5!CL:0000860;2.99e-15;33!CL:0002057;2.99e-15;33!CL:0000473;6.81e-12;39!CL:0000234;6.81e-12;39!CL:0000990;6.22e-11;8!CL:0000451;4.08e-09;10!CL:0000576;1.14e-07;48!CL:0000766;2.12e-07;69 | |ontology_enrichment_celltype_v019=CL:0001014;2.03e-45;2!CL:0001016;2.03e-45;2!CL:0000453;7.24e-19;5!CL:0000840;6.71e-16;5!CL:0000860;2.99e-15;33!CL:0002057;2.99e-15;33!CL:0000473;6.81e-12;39!CL:0000234;6.81e-12;39!CL:0000990;6.22e-11;8!CL:0000451;4.08e-09;10!CL:0000576;1.14e-07;48!CL:0000766;2.12e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.04e-45,2;CL:0001016,2.04e-45,2;CL:0000557,1.63e-20,67;CL:0000453,7.24e-19,5;CL:0002009,2.89e-17,61;CL:0000840,6.71e-16,5;CL:0001029,6.71e-16,5;CL:0000860,3.33e-13,42;CL:0002057,3.33e-13,42;CL:0000763,9.65e-13,108;CL:0000049,9.65e-13,108;CL:0000839,8.55e-12,66;CL:0000473,1.41e-11,48;CL:0000234,1.41e-11,48;CL:0002031,1.86e-11,120;CL:0000990,6.22e-11,8;CL:0000766,7.98e-11,72;CL:0000738,4.34e-10,136;CL:0002194,2.70e-09,59;CL:0000576,2.70e-09,59;CL:0000040,2.70e-09,59;CL:0000559,2.70e-09,59;CL:0000451,4.08e-09,10;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161;CL:0000037,4.03e-08,168;CL:0000988,1.08e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-09;42 | |ontology_enrichment_development_v019=CL:0002057;1.86e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.34e-42!80;UBERON:0001474!9.99e-39!86;UBERON:0002390!1.27e-36!102;UBERON:0003061!1.27e-36!102;UBERON:0004765!1.35e-34!101;UBERON:0001434!1.35e-34!101;UBERON:0002193!9.18e-33!112;UBERON:0002405!1.77e-29!115;UBERON:0002204!2.53e-18!167;UBERON:0003081!1.00e-13!216;UBERON:0002384!7.96e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!4.34e-42!80;UBERON:0001474!9.99e-39!86;UBERON:0002390!1.27e-36!102;UBERON:0003061!1.27e-36!102;UBERON:0004765!1.35e-34!101;UBERON:0001434!1.35e-34!101;UBERON:0002193!9.18e-33!112;UBERON:0002405!1.77e-29!115;UBERON:0002204!2.53e-18!167;UBERON:0003081!1.00e-13!216;UBERON:0002384!7.96e-11!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.19e-18,76;UBERON:0001474,8.70e-17,82;UBERON:0004765,2.68e-15,90;UBERON:0002405,8.35e-15,93;UBERON:0002390,4.77e-14,98;UBERON:0003061,4.77e-14,98;UBERON:0001434,9.12e-14,100;UBERON:0002193,9.65e-13,108;UBERON:0002204,3.59e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0.863077176966451,1.2808035326455,0.47296445977717,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0.449446968890169,0.612167784741805,1.28371610830437,1.91801137739712,0,0.199463657621632,0,0,0,0,1.00499466102697,0,0.868755378820466,0,0,0.316462387440884,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,2.46331618947972,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,19.5727285649805,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,0.929119112685311,0.863077176966451,1.2808035326455,0.47296445977717,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0.449446968890169,0.612167784741805,1.28371610830437,1.91801137739712,0,0.199463657621632,0,0,0,0,1.00499466102697,0,0.868755378820466,0,0,0.316462387440884,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,2.46331618947972,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,19.5727285649805,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@RASSF5 | |short_description=p23@RASSF5 | ||
}} | }} |
Latest revision as of 05:14, 20 September 2015
Short description: | p23@RASSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RASSF5_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 32bp_to_ENST00000491368_5end |
EntrezGene: | RASSF5 |
HGNC: | 17609 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.04e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.04e-45 | 2 |
granulocyte monocyte progenitor cell | 1.63e-20 | 67 |
Langerhans cell | 7.24e-19 | 5 |
macrophage dendritic cell progenitor | 2.89e-17 | 61 |
immature conventional dendritic cell | 6.71e-16 | 5 |
common dendritic progenitor | 6.71e-16 | 5 |
classical monocyte | 3.33e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-13 | 42 |
myeloid cell | 9.65e-13 | 108 |
common myeloid progenitor | 9.65e-13 | 108 |
myeloid lineage restricted progenitor cell | 8.55e-12 | 66 |
defensive cell | 1.41e-11 | 48 |
phagocyte | 1.41e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.86e-11 | 120 |
conventional dendritic cell | 6.22e-11 | 8 |
myeloid leukocyte | 7.98e-11 | 72 |
leukocyte | 4.34e-10 | 136 |
monopoietic cell | 2.70e-09 | 59 |
monocyte | 2.70e-09 | 59 |
monoblast | 2.70e-09 | 59 |
promonocyte | 2.70e-09 | 59 |
dendritic cell | 4.08e-09 | 10 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
hematopoietic stem cell | 4.03e-08 | 168 |
hematopoietic cell | 1.08e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.19e-18 | 76 |
bone element | 8.70e-17 | 82 |
skeletal element | 2.68e-15 | 90 |
immune system | 8.35e-15 | 93 |
hematopoietic system | 4.77e-14 | 98 |
blood island | 4.77e-14 | 98 |
skeletal system | 9.12e-14 | 100 |
hemolymphoid system | 9.65e-13 | 108 |
musculoskeletal system | 3.59e-08 | 167 |