FFCP PHASE1:Hg19::chr20:1472029..1472032,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:1472029..1472032,- to FFCP PHASE1:Hg19::chr20:1472029..1472032,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284759 | |EntrezGene=284759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16247 | |HGNC=16247 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JXA8 | |UniProt=Q5JXA8 | ||
|association_with_transcript=0bp_to_ENST00000381630_5end | |||
|cluster_id=chr20:1472029..1472032,- | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_5_at_SIRPB2_5end | |||
|id=chr20:1472029..1472032,- | |||
|ontology_enrichment_celltype=CL:0000766!2.73e-65!76;CL:0002057!9.17e-62!42;CL:0002194!6.33e-57!63;CL:0000576!6.33e-57!63;CL:0000040!6.33e-57!63;CL:0000559!6.33e-57!63;CL:0000860!9.72e-57!45;CL:0002009!1.03e-54!65;CL:0000839!9.89e-50!70;CL:0000557!8.08e-49!71;CL:0000763!1.31e-43!112;CL:0000049!1.31e-43!112;CL:0000738!1.06e-35!140;CL:0002087!3.18e-31!119;CL:0000037!6.00e-29!172;CL:0000566!6.00e-29!172;CL:0002032!3.43e-27!165;CL:0000837!3.43e-27!165;CL:0000988!2.60e-26!182;CL:0002031!3.43e-25!124;CL:0002393!1.02e-17!9;CL:0002397!1.02e-17!9;CL:0000094!6.27e-16!8;CL:0000081!4.68e-11!11;CL:0000775!2.56e-07!3;CL:0000875!3.00e-07!3;CL:0002396!3.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.73e-45;48!CL:0000766;1.25e-34;69!CL:0000094;1.72e-33;8!CL:0002393;5.89e-32;6!CL:0002397;5.89e-32;6!CL:0000860;2.12e-29;33!CL:0002057;2.12e-29;33!CL:0000473;4.19e-26;39!CL:0000234;4.19e-26;39!CL:0000081;3.99e-24;11!CL:0000775;5.04e-18;3!CL:0000875;7.91e-18;3!CL:0002396;7.91e-18;3!CL:0000763;5.01e-17;100!CL:0000738;1.63e-12;136!CL:0000771;2.98e-12;2!CL:0002087;1.53e-09;104!CL:0000767;4.54e-08;3!CL:0000988;5.66e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.65e-75,72;CL:0000860,2.22e-69,42;CL:0002057,2.22e-69,42;CL:0000473,1.93e-65,48;CL:0000234,1.93e-65,48;CL:0002194,1.16e-55,59;CL:0000576,1.16e-55,59;CL:0000040,1.16e-55,59;CL:0000559,1.16e-55,59;CL:0002009,1.08e-53,61;CL:0000839,2.80e-49,66;CL:0000557,1.78e-48,67;CL:0000763,2.13e-48,108;CL:0000049,2.13e-48,108;CL:0002393,4.34e-48,9;CL:0002397,4.34e-48,9;CL:0000738,8.50e-40,136;CL:0000094,1.70e-33,8;CL:0000037,4.63e-31,168;CL:0002032,1.62e-30,161;CL:0000837,1.62e-30,161;CL:0000988,3.62e-29,177;CL:0002087,1.93e-28,115;CL:0002031,7.72e-25,120;CL:0000081,3.96e-24,11;CL:0000775,4.41e-18,3;CL:0000875,6.92e-18,3;CL:0002396,6.92e-18,3;CL:0000771,3.17e-12,2;CL:0000134,2.26e-11,354;CL:0002320,5.05e-11,361;CL:0000219,8.55e-10,386;CL:0000048,2.74e-08,427;CL:0000723,4.42e-08,433;CL:0000767,4.72e-08,3;CL:0000034,8.21e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.92e-46;42!CL:0000049;9.50e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-52!102;UBERON:0003061!1.29e-52!102;UBERON:0002193!9.70e-50!112;UBERON:0002371!1.23e-41!80;UBERON:0001474!1.10e-37!86;UBERON:0002405!1.15e-33!115;UBERON:0004765!7.02e-30!101;UBERON:0001434!7.02e-30!101;UBERON:0003081!1.23e-18!216;UBERON:0007023!8.52e-17!115;UBERON:0002204!1.47e-12!167;UBERON:0000178!1.02e-08!15;UBERON:0000179!1.02e-08!15;UBERON:0000463!1.02e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.39e-43,98;UBERON:0003061,2.39e-43,98;UBERON:0002371,3.59e-42,76;UBERON:0002193,8.00e-39,108;UBERON:0001474,9.99e-39,82;UBERON:0004765,7.69e-35,90;UBERON:0002405,1.49e-33,93;UBERON:0001434,7.57e-31,100;UBERON:0003081,6.35e-18,203;UBERON:0002204,2.39e-16,167;UBERON:0002384,1.51e-10,371;UBERON:0000926,2.13e-09,315;UBERON:0004120,2.13e-09,315;UBERON:0006603,2.13e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,1.85779347979291,0,0,0,0,0,0,1.66198622559563,1.20326668482085,1.30206522429511,0.671746422719773,0.971680998056939,1.28787783817093,1.89017710413434,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.929119112685311,0.863077176966451,0.768482119587302,0.236482229888585,2.06847408441971,0.645484683583826,0,1.31769637679823,1.36453075028923,0.898893937780338,1.53041946185451,0.641858054152187,0,1.9791078011203,0.398927315243264,1.27867425159808,1.16083695451434,0.56738522469114,0.622822248995575,1.25624332628372,1.0429658368404,1.52032191293582,1.21079900526674,0,0.632924774881769,1.47878700418359,3.18906449947565,1.46761051855863,4.4931452458598,3.00353785683013,2.08943262706204,3.99017841237748,2.38700012638908,2.73996230646951,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,1.48631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,1.52927441428475,0,1.42939065274673,0.411362273086194,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.20686599172379,0,0,0.193766729508018,0.186224142887574,0,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,1.85779347979291,0,0,0,0,0,0,1.66198622559563,1.20326668482085,1.30206522429511,0.671746422719773,0.971680998056939,1.28787783817093,1.89017710413434,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.929119112685311,0.863077176966451,0.768482119587302,0.236482229888585,2.06847408441971,0.645484683583826,0,1.31769637679823,1.36453075028923,0.898893937780338,1.53041946185451,0.641858054152187,0,1.9791078011203,0.398927315243264,1.27867425159808,1.16083695451434,0.56738522469114,0.622822248995575,1.25624332628372,1.0429658368404,1.52032191293582,1.21079900526674,0,0.632924774881769,1.47878700418359,3.18906449947565,1.46761051855863,4.4931452458598,3.00353785683013,2.08943262706204,3.99017841237748,2.38700012638908,2.73996230646951,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,1.48631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,1.52927441428475,0,1.42939065274673,0.411362273086194,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.20686599172379,0,0,0.193766729508018,0.186224142887574,0,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p5@SIRPB2 | |||
}} | }} |
Latest revision as of 05:13, 20 September 2015
Short description: | p5@SIRPB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIRPB2_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000381630_5end |
EntrezGene: | SIRPB2 |
HGNC: | 16247 |
UniProt: | Q5JXA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.39e-43 | 98 |
blood island | 2.39e-43 | 98 |
bone marrow | 3.59e-42 | 76 |
hemolymphoid system | 8.00e-39 | 108 |
bone element | 9.99e-39 | 82 |
skeletal element | 7.69e-35 | 90 |
immune system | 1.49e-33 | 93 |
skeletal system | 7.57e-31 | 100 |
lateral plate mesoderm | 6.35e-18 | 203 |
musculoskeletal system | 2.39e-16 | 167 |
connective tissue | 1.51e-10 | 371 |
mesoderm | 2.13e-09 | 315 |
mesoderm-derived structure | 2.13e-09 | 315 |
presumptive mesoderm | 2.13e-09 | 315 |