FFCP PHASE1:Hg19::chr17:39637401..39637404,-: Difference between revisions
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|id=chr17:39637401..39637404,-
|short_description=p1@KRT35
|description=CAGE_peak_1_at_KRT35_5end
|association_with_transcript=-9bp_to_ENST00000246639,ENST000003939...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3886 | |EntrezGene=3886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6453 | |HGNC=6453 | ||
|TSSclassifier=strong | |||
|UniProt=C4AM86,Q92764 | |UniProt=C4AM86,Q92764 | ||
|association_with_transcript=-9bp_to_ENST00000246639,ENST00000393989,NM_002280,uc002hws.2_5end | |||
|cluster_id=chr17:39637401..39637404,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT35_5end | |||
|id=chr17:39637401..39637404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!1.46e-50!1;UBERON:0002363!6.58e-50!1;UBERON:0007647!6.58e-50!1;UBERON:0010115!6.58e-50!1;UBERON:0002360!9.18e-26!2;UBERON:0000094!9.18e-26!2;UBERON:0007645!9.18e-26!2;UBERON:0000014!8.82e-14!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0000014;7.35e-18;4!UBERON:0002331;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.23e-66,1;UBERON:0000014,7.35e-18,4;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10 | |||
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|short_description=p1@KRT35 | |||
}} | }} |
Latest revision as of 05:04, 20 September 2015
Short description: | p1@KRT35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT35_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -9bp_to_ENST00000246639, ENST00000393989, NM_002280, uc002hws.2_5end |
EntrezGene: | KRT35 |
HGNC: | 6453 |
UniProt: | C4AM86Q92764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 1.23e-66 | 1 |
zone of skin | 7.35e-18 | 4 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |