FFCP PHASE1:Hg19::chr4:103748271..103748290,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |||
|TSSclassifier=strong | |||
|UniProt=P61077 | |||
|association_with_transcript=0bp_to_ENST00000343106_5end | |||
|cluster_id=chr4:103748271..103748290,- | |||
|description=CAGE_peak_7_at_UBE2D3_5end | |||
|id=chr4:103748271..103748290,- | |||
|ontology_enrichment_celltype=CL:0002057!4.09e-10!42;CL:0000048!1.22e-09!430;CL:0000723!2.27e-09!436;CL:0000057!3.01e-09!75;CL:0000034!9.61e-09!444;CL:0000860!4.68e-08!45;CL:0000055!5.26e-08!180;CL:0000134!2.39e-07!358;CL:0002371!6.76e-07!591;CL:0002320!6.99e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-08;33!CL:0002057;2.00e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.18e-11,427;CL:0000723,1.21e-10,433;CL:0000860,4.09e-10,42;CL:0002057,4.09e-10,42;CL:0000034,5.75e-10,441;CL:0000057,2.02e-09,76;CL:0000134,2.99e-08,354;CL:0002320,9.59e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.45e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.99e-08!167;UBERON:0003102!3.23e-07!95;UBERON:0002384!4.64e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.18e-08,167;UBERON:0002384,6.27e-08,371;UBERON:0003102,7.47e-08,99 | |||
|phase1_expression=9.99231085988061,10.9191267184401,14.9411668341729,11.0080628188443,6.70441641640932,7.85104671690332,20.2639902534648,10.7392378482561,9.40268261519419,13.7611004440845,12.5604210235037,25.9945232834905,24.0027950187893,10.7676727075241,8.94772914465373,9.41255205032485,15.0673632005994,10.9546513558106,13.6621183661342,9.72656358806625,6.12002073732759,5.01527554364941,4.00730381983479,9.44433533002901,6.27713197974014,4.58480434487708,6.8143489243455,6.76912719297642,96.3742478279815,69.4731210555955,28.486166690158,10.1136334692682,10.843413076017,6.65557218300218,1.62681121218633,2.27470771979874,2.93600439334847,28.8077612436576,58.3584342138112,54.9037502911105,2.68698569087909,2.59114932815184,2.06060454107349,14.3944256391769,13.6035339727971,7.76268995801012,22.3131875429457,18.5025549609822,12.6979612066992,28.4815468398929,16.9066066309206,15.6078271726466,27.5796544589295,16.7826017731795,17.6054432572644,22.2125960660274,15.8285567033551,10.562003768919,33.6692281607993,24.7115350848592,19.1801137739712,17.1522676097092,14.3613833487575,15.344091019177,48.7551520896021,28.369261234557,17.4390229718761,25.1248665256743,19.2948679815475,16.0719745081786,41.1671661790691,40.8788175946197,30.3803891943249,8.66146673878961,12.7562579979026,9.43463904787692,8.42464733598713,7.0583139635508,14.1438516293431,9.12040779971995,15.1176674671308,13.1518190710536,0,2.18455444504853,0.889509253863555,0.426730222566507,1.60158394814405,1.14950487990897,0,3.81621501814146,26.1837965790346,49.3279239071589,46.2550606031527,18.5039860010636,15.694239763483,3.16060901730092,89.6996551719079,64.453765090863,57.9796227178616,3.51091640320424,13.6887351986108,11.8361951433683,15.5861382726329,8.24437380950284,13.8464776513173,12.6274319912664,14.0818009157808,5.63601806792971,6.50296737799391,3.28875809207352,4.97430032014527,7.24507714337631,11.7146384898028,9.63146981122967,8.36284190439814,7.0251792472491,14.562378756873,12.3705880373747,22.5187525897358,4.45991580053735,7.1619179924206,2.85135613334512,4.81840381048873,4.47953139040464,7.49584359314075,3.31488152861624,4.92676798152628,80.0378770602188,77.8250969730006,68.6467674404467,24.3806866313962,12.7433163343691,6.00954040664593,11.2046137239216,6.51739283826656,9.70471677037519,7.15757352345989,5.83961844363163,7.46825055596136,8.42571710357743,6.76327849837071,9.56147251133302,10.5645633604837,11.1235332835329,1.9472843619281,1.39303789839414,1.59549552622638,15.9788718284579,28.5997455390064,13.7439275491939,2.58391129576717,1.72046919021225,5.55424802572151,1.13061588384802,4.61449379830897,1.92582629358047,2.29894463190492,2.06733407335463,3.20189636418039,1.67360306382335,1.20848795132744,5.32190474002959,0.976248230192678,4.41195696415042,4.86085168729056,1.51809538082936,2.69435247151404,2.47745257063309,1.53316637465883,1.89853131913626,2.38162267109529,40.8519294051796,58.1670396222488,19.624232346414,16.4000744059455,14.3092478180975,18.8021036754771,21.512746556161,14.5414036701326,11.7742296029885,19.2148192313469,8.38669664618344,9.33633106199299,7.40908696383284,6.21155231831143,10.7463773627901,12.09969441408,23.6664646152135,13.4228833037038,10.2684927878001,14.9448680551801,6.3414629267633,7.60802838530218,8.14614678873041,9.79940022023488,7.49289335601785,10.6425554611038,20.1960485737949,25.4684937156914,29.1251635820168,18.6840716872222,8.41680569770331,11.1355482686048,23.8275139316397,19.3150153187569,16.5503409731471,19.0802334811378,7.94025282120147,22.9618733681743,13.8812302732069,17.3784158950841,16.5050102846421,22.774608961695,22.930008064061,16.9366339261747,18.396620214298,20.8515191044965,24.9909436501673,22.7363249646479,18.7509425909822,23.0756235135799,16.2210878146501,12.7170444232866,11.7889120429611,13.0918137883601,9.46455164783713,5.12289565744301,5.96383957446684,4.53156377191122,7.15261279606056,7.31730467539322,4.74470566798579,17.2094485562798,15.4377825166292,16.5761905622977,15.3241416250553,11.5500717067134,5.08719240171329,5.22612539242115,4.57920956778616,5.73528658208448,5.88274499049497,7.82993043066619,6.20224017536756,5.29797955838434,5.00171304030308,3.69077727312324,21.0362660705169,6.9967581926338,5.88034845542168,13.9430538304014,8.84544495009863,7.68026878685825,2.20731549707325,4.79654910318143,11.3234754797027,26.3400684980701,7.86812272803337,10.0528972411631,9.44402140617002,38.7711883319286,18.7188261350324,7.21656710126366,5.56465943880369,20.5465214912688,1.58803092537181,0.462985512576611,1.33177906564219,6.3216351836742,5.15091697256924,2.46217006087397,3.97807250736704,3.41851673264075,14.9974134378843,20.8297838966586,17.4383369608135,22.9269818119292,17.4380363108377,8.81780162079986,11.8239177095026,5.54705134283324,19.6961709763733,27.6710310560566,12.3717584757852,7.49275152647595,18.3354444267973,9.37739577680376,8.55362230113526,5.14137463516618,7.20823338825402,12.5763630357454,12.110157109299,10.899001720832,12.5408468753825,26.5007017303444,7.15312891703765,10.143633030672,13.0309677126587,17.6812642749322,12.3459539645828,4.25547396069835,11.9889980557245,12.8680194292333,18.4491345833091,13.9950857252731,7.81766842304964,6.75244702610837,8.71147060226772,16.5791657382772,15.6876022548053,14.9959486773086,3.64871341923571,6.02708509718552,6.32501818449095,13.179367052037,9.18895486672911,35.6592262601796,16.9394128801068,12.9450083206742,15.7573647651108,2.01753259188349,71.9162274737034,71.3727272785002,74.5673040785338,22.3603269315768,13.0139853857622,8.50617694055465,9.38091085872353,7.65526501983796,48.6854565565669,23.932916736322,34.3964876151909,9.07917038721635,6.00204625271613,5.96783052139418,9.98260135347874,20.3409047228764,14.3509197680881,16.2826566839871,14.4454127869305,15.9185252839189,6.2083842775503,11.2918351751024,11.9839959552107,21.1127183157441,7.83204629850962,7.54915532383883,33.2896522057849,35.8085573358904,29.3500783959472,8.48757200049526,33.2870879020994,15.119514666484,20.0967324333209,15.6531212753824,10.6650835884568,20.5022638809122,18.933168215468,15.1202685874991,23.7468906311986,23.748292845609,19.531789784444,23.241985151908,28.0397391759155,16.2694529843943,2.77976734060731,17.4440629163858,11.1417996612435,17.9110539136787,23.4897606728665,17.0461739447251,6.31679458070376,11.0131932059313,9.41219723012226,11.6911379722609,8.44413031143006,1.13733384070897,2.55140557914773,6.69339339916632,4.62681758070868,8.39933956385944,5.01689773854853,7.13653564526107,9.97291210714469,9.62661445305367,17.7600500083207,15.1632561594442,6.66770325302612,11.15249795379,16.2689197332152,8.55240396676095,10.4389189892911,9.07604499126468,33.8816667417742,29.90277131768,14.4615536859744,7.83032818166188,7.54838223861757,4.91211759123615,6.20264576180388,6.55263493696469,7.25083469571143,8.18175623194569,18.0735032362877,12.3963686520734,13.4533047155574,8.42243902464255,13.6563004154992,32.0743429015127,28.9627359084189,10.455559052409,15.4016790088044,20.7599351823639,14.7888608652762,16.308531281145,8.44436831777748,7.07100901783368,8.85862389212432,14.106634350363,26.1015747137561,25.2484002940013,14.0009429087412,14.9140241637854,13.3105618611653,15.6486106949551,10.9565534181488,17.9942408600251,9.5106192703805,16.0078213370813,9.26504104270222,15.1102363571396,16.9040234810809,15.8339897233263,13.5749214675564,10.1707304958219,8.82184549673799,13.9322184800656,13.1535265576129,17.9420415622673,9.18252652865286,21.3055895810839,21.6876448669825,12.1129109088864,11.4729081763241,10.2179002653646,17.1202104711,15.2547257550357,18.7885795414921,23.0506425071931,12.5226147342686,5.59895552391973,7.50532479258994,8.04362730642945,5.44454924306613,7.06078505825844,21.5252686335615,6.73885902670502,10.1988935313435,11.486170010348,3.55213326462519,6.117097657139,5.69647187174163,4.04994018278241,4.11362273086194,6.48473311192717,5.94034580961926,3.96562588147135,9.61416640147258,1.92495971052672,11.0268097191464,5.38829207864584,2.59684583357601,9.10615594859701,5.10164072732231,1.99579371432817,0.766021480529467,2.54008299268659,1.62310970137278,3.93116049358842,1.59764275323235,4.54371697741767,2.50634477090067,2.20079311142084,6.26293492904428,4.43959355820305,4.25846237690326,8.93113896364988,2.76516687877612,1.78940886313933,2.0021897005429,5.47086667125713,17.5395889554003,16.0013618632026,4.59774653409171,9.32601510393896,5.63948020351398,5.61421621224659,6.88588442577902,3.76217617423492,2.45175445410452,2.84136146806413,24.8294264127198,9.50286978664444,16.2795172112593,12.9239194209619,10.8315450636095,7.23506582648888,2.47205811340139,3.1668811219199,12.3533752715663,4.14425873296722,2.26739473068848,8.38603196517669,2.46169610922139,11.5084647434869,4.673154259661,9.30910108313168,0.511572370226872,12.4290691102536,2.3948309234694,15.5591786202492,9.69332746095218,18.9246920250177,5.98841394003583,4.94812746061943,5.16013999977555,10.8749936315219,5.91725931084598,11.4414142631745,13.9468732243082,1.72371686620732,7.87332456134787,5.90324982773194,12.4003794013937,9.52711865140723,22.8872604475625,10.5050296934663,10.3441666633742,16.6732901837019,5.77373856650648,18.8222054776114,8.15672740140249,11.7360317522411,1.38338342632836,5.83424688663519,5.64966333994442,17.8640649449875,9.70934490059741,17.5901476086149,5.10966490978682,3.45356564069054,4.65392709320438,14.2125266188824,12.7440647306531,13.9291917189949,4.93359705082881,8.42363868596007,2.95397290339238,7.83517479163909,10.6014803575456,4.760550074326,1.99052386215701,5.57282656371037,3.66618086960175,12.7504085332667,5.93106906943214,10.4421949505455,9.9753676811402,2.40773294189637,13.3530734063443,3.28418620588199,7.82658475728359,11.6534582176365,10.2591944740842,4.83962864194656,12.2429104652196,21.230690755172,4.96067284067825,3.83646308169814,7.31119259977904,3.30991955875499,10.9876521442529,5.97362148864794,4.83836228250648,7.48843234270949,7.81018822508089,19.8924566751187,6.18120366720858,8.73633341210151,3.95567874684718,3.96700958285249,3.43519790305072,3.94154193855404,12.9965282094482,19.8576285055876,8.81324889044077,8.0854735541583,14.7048812660212,19.6263467463224,20.7284465698891,13.9476347237669,5.12287187374446,14.9857207186598,6.48406877193477,7.78848853928227,10.4672948695798,12.2446578289927,15.0345568034173,9.19206735005502,11.6877617223308,10.983298862795,6.42588771108827,10.4022212364547,13.2092463516154,7.8036065968436,3.83239764200917,25.7859264851974,5.78352179414492,9.49560164325664,5.04152932825704,6.46085722119133,9.98395002494956,7.72606886645828,6.02562935093056,7.32299850105316,15.4928949923234,0,9.29641551225239,7.41742725430498,10.8519705605238,7.38206111360616,4.14899327122344,22.2664313146605,11.0324758950376,4.66184130548556,4.81388028090318,4.56984371832104,48.3693866835726,37.9162957733395,19.622106800542,12.4110834411728,8.35340497371501,7.29118775076474,7.60322422939727,3.40645944732405,4.79787993298613,9.29103924285377,7.94510364438518,16.273186409904,11.402991636828,12.963322368019,13.3900817644858,9.578415324999,6.56740165994712,11.0752214160524,7.25197385728804,6.74140274919179,3.97520666736664,17.0653502397247,9.91744513070175,5.30369197441421,11.2770403570668,11.2126783196079,16.1920434252656,6.62782488555513,5.45782623993146,2.96417447846916,3.65377795142688,27.4486740841178,10.33633826402,9.77690586688531,15.3172788381731,11.803414705553,6.28216385000937,26.5820453990096,24.6493055101966,14.8977207540735,14.9086390879419,8.09782076219022,15.2136187206389,10.791193525026,8.74862855734746,15.923157341873,7.70756400571412,5.41111385305795,4.68334905806882,3.4781046866598,16.1195187117824,13.3216586612918,22.1922344601045,11.9323893323306,8.80487656134013,20.4656580967203,18.3072054717539,16.0304779189033,13.9893480524502,13.4548186490567,16.5668637850251,19.341533823035,16.9236622995123,10.7823614038622,15.9505028734797,22.4350376579046,11.4195782837886,22.0867023057901,16.6817000613911,17.4574712834457,15.2522991000334,25.9858905531956,18.3124108801363,12.4008607045578,15.4528067332257,17.1742239270619,5.04739592914604,17.3357847366573,24.6607830081165,14.6156803500518,15.1892970093222,7.40871917836269,18.5999895424915,8.95444205407437,1.54400723580486,14.0341791730373,17.4922254486422,12.7323265258804,8.44712203265363,5.38107189034688,6.56317649289277,24.612656450368,14.6553942320835,7.79441235357554,5.0488639319078,3.76200406788442,7.20741667462108,9.09359762388761,10.3542940445727,5.39965968808311,3.62751880960079,5.85530930846773,10.215287164203,20.2516545277025,7.27373440141111,10.5753134205605,3.83683113910955,6.57731349519759,4.560712313821,4.14996625129653,3.73411565898855,4.46407332213534,6.81646703424512,22.3457967189298,11.1301522728697,0.788617450012533,4.00285374142735,12.3436580291739,11.6373281394216,15.2865555729574,11.3357261060468,7.50279137568611,23.9986146161683,10.0828678488687,21.6462200213002,20.3459313496132,5.71077681036618,13.0536465606364,11.3250934413831,11.5560017068658,8.66442496127537,14.8739017232195,8.28431911272121,9.15014621734864,8.2731361184183,11.0937787786936,3.12605604493237,4.19050711170276,8.51613971052503,10.9413503800613,19.2482116162425,21.8701867611877,16.1215701270924,15.4100418771194,17.503193888583,1.64477330057155,5.45832296228224,0.703484977438482,8.68784507949248,24.1065826145229,16.4779023887224,24.2786241694653,13.4320692897266,19.15971195513,2.99608367645026,13.2045767266812,20.0510712281654,19.9291503895433,7.8007934983419,8.00866093622898,6.12246124234009,15.8686745815162,3.92381028639305,2.73947616152849,10.3645243784938,7.6440270061928,12.1510125100316,7.7426669749036,8.48562405187314,11.3007876996677,19.2410727535261,26.1092366845426,32.6072291249444,38.019281399775,3.8720462293825,12.4248600767094,10.6516755948947,12.2782244555369,5.4985648450572,14.8899065118874,6.68877257284203,6.37575961247416,11.3854270993682,8.53425474875886,10.3588613950063,11.6008971747559,15.0775876073966,7.28566489588709,1.63757624423474,11.1412434090366,5.35140408499059,9.82630913738952,2.30875085165401,8.90680777043374,4.24457869593696,5.02686989159102,10.3469805199535,8.8253395831406,15.3189755616057,14.5268265665059,10.396624011448,7.6078030965012,20.5611808772258,3.94732455515385,4.5120521581504,3.19811698959773,8.21348117586025,12.7042153817649,9.22775716925435,11.6853822119443,4.12856355064087,7.45365832387547,6.78417717430694,15.910008704674,13.5268714005517,4.7612415646386,18.2277558901708,16.6383226307311,22.0639546683132,1.7663299476911,4.15209173462043,7.98200556372053,6.52728510348683,9.61982658956018,2.75684698604535,2.75778293221613,8.86610769153401,14.2020988982775,19.9000665470107,7.86090768550404,4.90438158372256,6.66580408098473,5.61923515573253,4.84182771507692,5.15806567870822,5.85553856159117,6.06351566874658,11.7567043864359,6.50243272062034,9.96810384615895,8.60666464712116,5.98788641782824,14.8967981558083,15.6889198440242,11.5843369372164,9.97059743383114,2.34640942403454,7.45672809515485,4.47585796147312,12.6493787095247,5.23311863336668,2.56454793842586 | |||
|short_description=p7@UBE2D3 | |||
}} |
Latest revision as of 04:59, 20 September 2015
Short description: | p7@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UBE2D3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343106_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | P61077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.18e-11 | 427 |
somatic stem cell | 1.21e-10 | 433 |
classical monocyte | 4.09e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.09e-10 | 42 |
stem cell | 5.75e-10 | 441 |
fibroblast | 2.02e-09 | 76 |
mesenchymal cell | 2.99e-08 | 354 |
connective tissue cell | 9.59e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.18e-08 | 167 |
connective tissue | 6.27e-08 | 371 |
surface structure | 7.47e-08 | 99 |