FFCP PHASE1:Hg19::chr17:39553812..39553817,-: Difference between revisions
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|id=chr17:39553812..39553817,-
|short_description=p3@KRT31
|description=CAGE_peak_3_at_KRT31_5end
|association_with_transcript=26bp_to_ENST00000251645,NM_002277,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3881 | |EntrezGene=3881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6448 | |HGNC=6448 | ||
|TSSclassifier=strong | |||
|UniProt=Q15323 | |UniProt=Q15323 | ||
|association_with_transcript=26bp_to_ENST00000251645,NM_002277,uc002hwn.2,uc010cxn.2_5end | |||
|cluster_id=chr17:39553812..39553817,- | |||
|description=CAGE_peak_3_at_KRT31_5end | |||
|id=chr17:39553812..39553817,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000312;1.48e-40;5!CL:0000240;4.27e-34;6!CL:0000311;4.27e-34;6!CL:0000079;4.27e-34;6!CL:0000237;4.27e-34;6!CL:0000362;2.62e-23;9!CL:0002159;1.43e-15;14!CL:0002077;2.32e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,1.48e-40,5;CL:0000240,4.27e-34,6;CL:0000311,4.27e-34,6;CL:0000079,4.27e-34,6;CL:0000237,4.27e-34,6;CL:0000036,4.27e-34,6;CL:0000357,4.27e-34,6;CL:0000114,4.27e-34,6;CL:0000362,2.62e-23,9;CL:0002159,1.43e-15,14;CL:0002077,2.74e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;4.27e-34;6!CL:0000114;4.27e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002360!3.34e-24!2;UBERON:0000094!3.34e-24!2;UBERON:0007645!3.34e-24!2;UBERON:0007029!1.82e-13!1;UBERON:0007023!5.13e-13!115;UBERON:0007190!6.82e-13!1;UBERON:0002581!7.68e-13!1;UBERON:0002363!8.64e-13!1;UBERON:0007647!8.64e-13!1;UBERON:0010115!8.64e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0001017!3.71e-10!82;UBERON:0005743!1.20e-09!86;UBERON:0000073!1.19e-08!94;UBERON:0001016!1.19e-08!94;UBERON:0000200!1.26e-08!6;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0000955!1.98e-07!69;UBERON:0006238!1.98e-07!69;UBERON:0002346!2.51e-07!90;UBERON:0000341!3.28e-07!2;UBERON:0003127!3.93e-07!2;UBERON:0001049!7.13e-07!57;UBERON:0005068!7.13e-07!57;UBERON:0006241!7.13e-07!57;UBERON:0007135!7.13e-07!57;UBERON:0002780!8.10e-07!41;UBERON:0001890!8.10e-07!41;UBERON:0006240!8.10e-07!41;UBERON:0004121!8.92e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.22e-14;15!UBERON:0007376;1.22e-14;15!UBERON:0002199;2.32e-07;46!UBERON:0010371;2.32e-07;31!UBERON:0002416;2.32e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.22e-14,15;UBERON:0007376,1.22e-14,15;UBERON:0007383,1.22e-14,15 | |||
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|short_description=p3@KRT31 | |||
}} | }} |
Latest revision as of 04:54, 20 September 2015
Short description: | p3@KRT31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT31_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000251645, NM_002277, uc002hwn.2, uc010cxn.2_5end |
EntrezGene: | KRT31 |
HGNC: | 6448 |
UniProt: | Q15323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 1.48e-40 | 5 |
stratified squamous epithelial cell | 4.27e-34 | 6 |
keratin accumulating cell | 4.27e-34 | 6 |
stratified epithelial cell | 4.27e-34 | 6 |
keratinizing barrier epithelial cell | 4.27e-34 | 6 |
epithelial fate stem cell | 4.27e-34 | 6 |
stratified epithelial stem cell | 4.27e-34 | 6 |
surface ectodermal cell | 4.27e-34 | 6 |
epidermal cell | 2.62e-23 | 9 |
general ecto-epithelial cell | 1.43e-15 | 14 |
ecto-epithelial cell | 2.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.22e-14 | 15 |
outer epithelium | 1.22e-14 | 15 |
enveloping layer of ectoderm | 1.22e-14 | 15 |