FFCP PHASE1:Hg19::chrX:155110970..155111047,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:155110970..155111047,+
|short_description=p1@VAMP7
|description=CAGE_peak_1_at_VAMP7_5end
|association_with_transcript=0bp_to_ENST00000262640,ENST000004606...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6845 | |EntrezGene=6845 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11486 | |HGNC=11486 | ||
|TSSclassifier=strong | |||
|UniProt=E5RH06 | |UniProt=E5RH06 | ||
|association_with_transcript=0bp_to_ENST00000262640,ENST00000460621,ENST00000463317,ENST00000479687,ENST00000488344_5end | |||
|cluster_id=chrX:155110970..155111047,+ | |||
|coexpression_cluster_id=C4865 | |||
|description=CAGE_peak_1_at_VAMP7_5end | |||
|id=chrX:155110970..155111047,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!3.61e-10!41;UBERON:0003134!1.06e-08!37;UBERON:0000474!1.06e-08!37;UBERON:0001049!3.28e-07!57;UBERON:0005068!3.28e-07!57;UBERON:0006241!3.28e-07!57;UBERON:0007135!3.28e-07!57;UBERON:0000310!3.75e-07!10;UBERON:0005795!9.90e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003134;3.38e-08;33!UBERON:0003100;1.02e-07;41!UBERON:0000474;2.40e-07;37!UBERON:0000310;3.82e-07;10!UBERON:0003975;9.47e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.61e-10,41;UBERON:0003134,1.06e-08,37;UBERON:0000474,1.06e-08,37;UBERON:0000310,3.75e-07,10;UBERON:0001049,7.91e-07,56;UBERON:0005068,7.91e-07,56;UBERON:0006241,7.91e-07,56;UBERON:0007135,7.91e-07,56;UBERON:0005795,9.90e-07,22 | |||
|phase1_expression=57.4103678494959,42.8201047781966,56.8046248506764,43.0315182918461,0,0,27.8629865985142,22.7419154433659,24.0290777943851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4257869382379,27.6678986446317,24.9513176764363,0,0,0,0,8.13255980701275,0,0,0,0,0,0,0,0,45.9929005746951,0,46.5274364094607,0,35.659856994609,0,0,49.8627257141117,51.2092458333428,0,48.9518215869371,43.7827014535506,0,41.9822108442459,52.8960974114719,0,55.2819771734908,50.8099261335698,0,34.5242047931482,56.0747210317417,0,44.7535988059329,51.3670352372594,0,59.1681136545796,41.9585270978761,0,48.433112369241,48.4319602106695,0,51.8998315403051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0178188539283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.4004266040303,61.8160567412399,0,41.9743498777402,0,46.0607301648661,0,17.2046919021225,18.3984465852025,0,20.1359729380755,0,0,0,0,0,23.3641003923305,20.5273468543998,15.6199716830828,27.2070679455943,0,0,0,0,0,0,21.8010075277185,0,0,0,38.7638122322348,39.3820891276843,21.0530597493018,12.6208113129478,23.7627816072899,0,24.5522690178321,23.186749551213,0,0,0,0,0,0,0,13.1208518955223,22.566750763322,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4351425331095,0,0,0,13.0954434052869,45.0606090407177,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9465186883732,36.0024879179902,0,20.3696089236424,17.8915187234005,18.4748369162534,21.4578383881817,17.1578178595427,16.7889585174882,0,31.5188059714514,23.4829366299217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3641928583382,23.5237795443216,0,0,0,0,0,0,0,0,0,17.3844967551041,18.0282094039923,0,0,51.1291198273225,0,44.3472818444989,0,30.9872488551855,22.960081142603,12.651628412452,82.2747607286226,66.6526645480121,32.3431860243604,38.7682674691626,28.6570323877882,0,0,0,0,0,0,0,0,0,0,38.5229712958178,0,0,46.0072941691826,42.6430491336601,0,0,0,0,0,0,0,0,0,56.9720422642618,63.6219424778215,54.8851721589493,0,0,0,46.2475971098754,34.4585807502342,51.3492858146586,40.8283284802573,0,32.0519124199413,45.3944833173786,0,0,0,0,0,0,0,0,0,0,59.6758339347891,0,0,0,0,47.2836820312479,0,0,21.9690652801235,0,0,0,21.5711927193793,0,0,0,0,0,0,0,18.3078983461547,0,52.3507474497619,30.5389326843244,41.818354070528,57.1500605680426,55.7760901482707,0,25.2310712956485,26.2156479464514,30.8957402044841,34.7397869938413,0,25.1014417473512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.2643720722688,62.872238939488,0,0,0,0,0,0,0,0,0,0,0,27.7678657806443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9178540049591,0,0,0,0,0,0,0,21.4715421578461,19.8491523676605,0,0,0,0,17.0444716648671,17.9697628897855,15.7749537418055,0,0,0,37.959433855554,0,0,0,0,14.3370947961013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6895444058566,0,0,0,0,0,0,0,0,0,0,43.2436512333544,0,36.7363157829479,0,0,33.6418527775358,0,0,0,0,0,0,0,0,41.3009240317297,0,0,0,36.8935986118521,0,33.5280653231568,0,0,0,31.8127247285215,29.3999080297972,0,0,0,0,0,29.4761314989503,54.7137451386528,0,49.7663340258892,0,0,0,0,0,0,0,0,0,30.2096202858871,45.566659998018,34.7999796208701,0,0,0,0,0,17.7097494831958,43.4013279048781,24.239884163707,19.8356257212208,13.269511191747,0,0,29.6312620771653,43.3607844706456,26.0091873742834,0,0,0,0,0,0,0,0,36.8903602528308,0,46.4727060871392,48.4274459764817,49.1717249839219,49.1462167755639,0,32.9156980663722,20.0776354035752,0,46.7399461842917,15.9241908972561,0,26.2742962321459,0,0,0,0,0,0,0,0,0,0,20.5684217282729,0,39.491612267805,0,0,0,0,0,0,25.0456400506218,34.9460175993109,20.8271686002157,23.1262057897931,33.6048537400354,0,0,31.6393203315308,30.0397093224223,32.4356055360176,0,14.474004777406,25.3098429674196,0,0,0,32.2659781512425,27.0936812450184,0,0,25.6480942534309,0,0,0,0,23.3337094270627,0,0,0,0,54.037825983881,33.1311016918623,0,28.3645191337172,0,0,0,0,16.3736780409173,15.02291168478,0,0,52.9640828807333,0,0,0,0,0,0,45.3280923191303,29.1475289078772,0,15.9545746452791,15.786732845109,0,0,0,46.2899868886987,36.6446538941272,0,0,0,26.8681276247223,0,21.8490350220592,22.1213627759632,27.1499800876856,32.8404166656482,28.0865129694092,0,0,29.6475157906634,0,0,0,50.8082018500894,31.0746614095321,0,0,0,0,0,0,60.4691593607709,67.838477298159,17.8735552175651,44.6094598762969,40.3610729376547,43.1947263236481,42.6234419922746,0,38.1009317385804,33.191144053334,26.290095448365,46.4461448508958,27.066688574992,0,0,43.4931819708131,48.0727702607024,0,36.4662020532166,0,0,0,0,0,0,0,0,0,0,0,0,29.9477922267761,0,28.102595194603,0,30.3059554596114,0,24.3417326575494,0,28.887822057531,27.0954502211814,30.7194193141517,0,0,20.4014159978208,0,0,49.2121103091739,46.8066187889747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4812378472565,0,0,0,40.9512311058016,29.0012032329389,61.2805157740018,0,0,24.7989570711575,40.8611486568122,0,0,0,0,0,0,0,23.9322867235176,0,0,39.6637891761003,45.1566177927854,54.9666362658736,52.0370986385555,33.504214650615,53.2867130594568,0,35.4241440813962,27.6166576168872,0,0,0,29.0656162137332,0,0,0,0,0,43.0961767877899,0,27.6493548741622,20.9836816094428,0,0,0,0,29.1276489847579,0,25.775577254257,30.1762722891729,0,24.6138664058199,0,0,18.994094390839,51.1049710558381,40.1776376908715,29.9292512774753,16.3880713143891,21.8555703697246,40.0047689433501,30.0760707520584,45.4443225009159,0,0,0,0,0,24.6671476168123,0,31.9605552178323,0,0,0,35.237035416398,18.3661452081638,0,0,22.379345729608,22.8762759305893,33.1804637670764,0,0,0,0,36.1988852299599,0,0,17.8968690876468,0,0,0,0,0,36.9140354724946,23.3939463462106,0,0,0,0,0,0,26.6642663814828,0,0,37.0012178949553,58.6962316673686,34.1603360376149,26.2046551101708,0,0,0,39.376815434422,0,46.935017938187,0,42.359510518298,0,33.5414624574396,0,0,0,24.8642615042238,0,0,0,23.4669550193247,0,0,0,0,0,0,0,0,33.1667775783512,31.6504967337399,0,34.5193425622424,0,0,0,0,0,0,24.298564377055,0,0,0,0,0,54.0602390403432,0,0,22.7369086180132,34.5861751568378,14.6466490320813,0,0 | |phase1_expression=57.4103678494959,42.8201047781966,56.8046248506764,43.0315182918461,0,0,27.8629865985142,22.7419154433659,24.0290777943851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4257869382379,27.6678986446317,24.9513176764363,0,0,0,0,8.13255980701275,0,0,0,0,0,0,0,0,45.9929005746951,0,46.5274364094607,0,35.659856994609,0,0,49.8627257141117,51.2092458333428,0,48.9518215869371,43.7827014535506,0,41.9822108442459,52.8960974114719,0,55.2819771734908,50.8099261335698,0,34.5242047931482,56.0747210317417,0,44.7535988059329,51.3670352372594,0,59.1681136545796,41.9585270978761,0,48.433112369241,48.4319602106695,0,51.8998315403051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.0178188539283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.4004266040303,61.8160567412399,0,41.9743498777402,0,46.0607301648661,0,17.2046919021225,18.3984465852025,0,20.1359729380755,0,0,0,0,0,23.3641003923305,20.5273468543998,15.6199716830828,27.2070679455943,0,0,0,0,0,0,21.8010075277185,0,0,0,38.7638122322348,39.3820891276843,21.0530597493018,12.6208113129478,23.7627816072899,0,24.5522690178321,23.186749551213,0,0,0,0,0,0,0,13.1208518955223,22.566750763322,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4351425331095,0,0,0,13.0954434052869,45.0606090407177,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9465186883732,36.0024879179902,0,20.3696089236424,17.8915187234005,18.4748369162534,21.4578383881817,17.1578178595427,16.7889585174882,0,31.5188059714514,23.4829366299217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3641928583382,23.5237795443216,0,0,0,0,0,0,0,0,0,17.3844967551041,18.0282094039923,0,0,51.1291198273225,0,44.3472818444989,0,30.9872488551855,22.960081142603,12.651628412452,82.2747607286226,66.6526645480121,32.3431860243604,38.7682674691626,28.6570323877882,0,0,0,0,0,0,0,0,0,0,38.5229712958178,0,0,46.0072941691826,42.6430491336601,0,0,0,0,0,0,0,0,0,56.9720422642618,63.6219424778215,54.8851721589493,0,0,0,46.2475971098754,34.4585807502342,51.3492858146586,40.8283284802573,0,32.0519124199413,45.3944833173786,0,0,0,0,0,0,0,0,0,0,59.6758339347891,0,0,0,0,47.2836820312479,0,0,21.9690652801235,0,0,0,21.5711927193793,0,0,0,0,0,0,0,18.3078983461547,0,52.3507474497619,30.5389326843244,41.818354070528,57.1500605680426,55.7760901482707,0,25.2310712956485,26.2156479464514,30.8957402044841,34.7397869938413,0,25.1014417473512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.2643720722688,62.872238939488,0,0,0,0,0,0,0,0,0,0,0,27.7678657806443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9178540049591,0,0,0,0,0,0,0,21.4715421578461,19.8491523676605,0,0,0,0,17.0444716648671,17.9697628897855,15.7749537418055,0,0,0,37.959433855554,0,0,0,0,14.3370947961013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6895444058566,0,0,0,0,0,0,0,0,0,0,43.2436512333544,0,36.7363157829479,0,0,33.6418527775358,0,0,0,0,0,0,0,0,41.3009240317297,0,0,0,36.8935986118521,0,33.5280653231568,0,0,0,31.8127247285215,29.3999080297972,0,0,0,0,0,29.4761314989503,54.7137451386528,0,49.7663340258892,0,0,0,0,0,0,0,0,0,30.2096202858871,45.566659998018,34.7999796208701,0,0,0,0,0,17.7097494831958,43.4013279048781,24.239884163707,19.8356257212208,13.269511191747,0,0,29.6312620771653,43.3607844706456,26.0091873742834,0,0,0,0,0,0,0,0,36.8903602528308,0,46.4727060871392,48.4274459764817,49.1717249839219,49.1462167755639,0,32.9156980663722,20.0776354035752,0,46.7399461842917,15.9241908972561,0,26.2742962321459,0,0,0,0,0,0,0,0,0,0,20.5684217282729,0,39.491612267805,0,0,0,0,0,0,25.0456400506218,34.9460175993109,20.8271686002157,23.1262057897931,33.6048537400354,0,0,31.6393203315308,30.0397093224223,32.4356055360176,0,14.474004777406,25.3098429674196,0,0,0,32.2659781512425,27.0936812450184,0,0,25.6480942534309,0,0,0,0,23.3337094270627,0,0,0,0,54.037825983881,33.1311016918623,0,28.3645191337172,0,0,0,0,16.3736780409173,15.02291168478,0,0,52.9640828807333,0,0,0,0,0,0,45.3280923191303,29.1475289078772,0,15.9545746452791,15.786732845109,0,0,0,46.2899868886987,36.6446538941272,0,0,0,26.8681276247223,0,21.8490350220592,22.1213627759632,27.1499800876856,32.8404166656482,28.0865129694092,0,0,29.6475157906634,0,0,0,50.8082018500894,31.0746614095321,0,0,0,0,0,0,60.4691593607709,67.838477298159,17.8735552175651,44.6094598762969,40.3610729376547,43.1947263236481,42.6234419922746,0,38.1009317385804,33.191144053334,26.290095448365,46.4461448508958,27.066688574992,0,0,43.4931819708131,48.0727702607024,0,36.4662020532166,0,0,0,0,0,0,0,0,0,0,0,0,29.9477922267761,0,28.102595194603,0,30.3059554596114,0,24.3417326575494,0,28.887822057531,27.0954502211814,30.7194193141517,0,0,20.4014159978208,0,0,49.2121103091739,46.8066187889747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4812378472565,0,0,0,40.9512311058016,29.0012032329389,61.2805157740018,0,0,24.7989570711575,40.8611486568122,0,0,0,0,0,0,0,23.9322867235176,0,0,39.6637891761003,45.1566177927854,54.9666362658736,52.0370986385555,33.504214650615,53.2867130594568,0,35.4241440813962,27.6166576168872,0,0,0,29.0656162137332,0,0,0,0,0,43.0961767877899,0,27.6493548741622,20.9836816094428,0,0,0,0,29.1276489847579,0,25.775577254257,30.1762722891729,0,24.6138664058199,0,0,18.994094390839,51.1049710558381,40.1776376908715,29.9292512774753,16.3880713143891,21.8555703697246,40.0047689433501,30.0760707520584,45.4443225009159,0,0,0,0,0,24.6671476168123,0,31.9605552178323,0,0,0,35.237035416398,18.3661452081638,0,0,22.379345729608,22.8762759305893,33.1804637670764,0,0,0,0,36.1988852299599,0,0,17.8968690876468,0,0,0,0,0,36.9140354724946,23.3939463462106,0,0,0,0,0,0,26.6642663814828,0,0,37.0012178949553,58.6962316673686,34.1603360376149,26.2046551101708,0,0,0,39.376815434422,0,46.935017938187,0,42.359510518298,0,33.5414624574396,0,0,0,24.8642615042238,0,0,0,23.4669550193247,0,0,0,0,0,0,0,0,33.1667775783512,31.6504967337399,0,34.5193425622424,0,0,0,0,0,0,24.298564377055,0,0,0,0,0,54.0602390403432,0,0,22.7369086180132,34.5861751568378,14.6466490320813,0,0 | ||
|short_description=p1@VAMP7 | |||
}} | }} |
Latest revision as of 04:52, 20 September 2015
Short description: | p1@VAMP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VAMP7_5end |
Coexpression cluster: | C4865_Mast_Neutrophils_Dendritic_lymphoma_CD14_CD4_tridermal |
Association with transcript: | 0bp_to_ENST00000262640, ENST00000460621, ENST00000463317, ENST00000479687, ENST00000488344_5end |
EntrezGene: | VAMP7 |
HGNC: | 11486 |
UniProt: | E5RH06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female organism | 3.61e-10 | 41 |
female reproductive organ | 1.06e-08 | 37 |
female reproductive system | 1.06e-08 | 37 |
breast | 3.75e-07 | 10 |
neural tube | 7.91e-07 | 56 |
neural rod | 7.91e-07 | 56 |
future spinal cord | 7.91e-07 | 56 |
neural keel | 7.91e-07 | 56 |
embryonic uterus | 9.90e-07 | 22 |