FFCP PHASE1:Hg19::chr17:39507076..39507080,-: Difference between revisions
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|id=chr17:39507076..39507080,-
|short_description=p1@KRT33A
|description=CAGE_peak_1_at_KRT33A_5end
|association_with_transcript=-12bp_to_ENST00000007735_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3883 | |EntrezGene=3883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6450 | |HGNC=6450 | ||
|TSSclassifier=strong | |||
|UniProt=O76009 | |UniProt=O76009 | ||
|association_with_transcript=-12bp_to_ENST00000007735_5end | |||
|cluster_id=chr17:39507076..39507080,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT33A_5end | |||
|id=chr17:39507076..39507080,- | |||
|ontology_enrichment_celltype=CL:0002253!4.34e-09!2;CL:0002535!6.94e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | |||
|ontology_enrichment_disease=DOID:3151!1.41e-16!1;DOID:3149!1.41e-16!1;DOID:4362!4.96e-13!5;DOID:3451!5.94e-09!2;DOID:4159!5.94e-09!2;DOID:0060122!5.94e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!4.72e-17!1;UBERON:0002426!6.47e-17!1;UBERON:0003831!6.47e-17!1;UBERON:0003898!6.47e-17!1;UBERON:0004830!6.47e-17!1;UBERON:0001774!6.47e-17!1;UBERON:0003830!6.47e-17!1;UBERON:0005175!6.47e-17!1;UBERON:0003897!6.47e-17!1;UBERON:0001103!6.47e-17!1;UBERON:0010084!6.47e-17!1;UBERON:0000014!1.93e-16!4;UBERON:0002370!3.59e-16!4;UBERON:0005058!3.59e-16!4;UBERON:0009113!3.59e-16!4;UBERON:0003295!3.59e-16!4;UBERON:0005562!3.59e-16!4;UBERON:0000974!2.44e-14!10;UBERON:0003351!4.16e-11!6;UBERON:0000002!5.09e-11!6;UBERON:0001560!5.09e-11!6;UBERON:0004177!1.18e-09!7;UBERON:0001630!4.02e-09!2;UBERON:0005090!4.02e-09!2;UBERON:0006955!6.94e-09!2;UBERON:0004801!6.94e-09!2;UBERON:0003408!5.11e-07!10;UBERON:0001042!5.11e-07!10;UBERON:0009145!5.11e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0002426;4.66e-66;1!UBERON:0003831;4.66e-66;1!UBERON:0003898;4.66e-66;1!UBERON:0004830;4.66e-66;1!UBERON:0003830;4.66e-66;1!UBERON:0005175;4.66e-66;1!UBERON:0001774;4.66e-66;1!UBERON:0001103;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2!UBERON:0000014;7.35e-18;4!UBERON:0000922;1.35e-08;49!UBERON:0002331;6.13e-08;10!UBERON:0001443;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.23e-66,1;UBERON:0002426,4.66e-66,1;UBERON:0003831,4.66e-66,1;UBERON:0003898,4.66e-66,1;UBERON:0004830,4.66e-66,1;UBERON:0003830,4.66e-66,1;UBERON:0005175,4.66e-66,1;UBERON:0001774,4.66e-66,1;UBERON:0001103,4.66e-66,1;UBERON:0010084,4.66e-66,1;UBERON:0005090,7.05e-34,2;UBERON:0001630,7.05e-34,2;UBERON:0000014,7.35e-18,4;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10;UBERON:0001443,2.63e-07,11 | |||
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|short_description=p1@KRT33A | |||
}} | }} |
Latest revision as of 04:47, 20 September 2015
Short description: | p1@KRT33A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT33A_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -12bp_to_ENST00000007735_5end |
EntrezGene: | KRT33A |
HGNC: | 6450 |
UniProt: | O76009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 1.23e-66 | 1 |
chest muscle | 4.66e-66 | 1 |
respiratory system muscle | 4.66e-66 | 1 |
skeletal muscle of trunk | 4.66e-66 | 1 |
respiratory system skeletal muscle | 4.66e-66 | 1 |
thoracic segment muscle | 4.66e-66 | 1 |
chest organ | 4.66e-66 | 1 |
muscle of trunk | 4.66e-66 | 1 |
diaphragm | 4.66e-66 | 1 |
future diaphragm | 4.66e-66 | 1 |
muscle structure | 7.05e-34 | 2 |
muscle organ | 7.05e-34 | 2 |
zone of skin | 7.35e-18 | 4 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
chest | 2.63e-07 | 11 |