FFCP PHASE1:Hg19::chr12:6937564..6937585,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6937564..6937585,+ to FFCP PHASE1:Hg19::chr12:6937564..6937585,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10536 | |EntrezGene=10536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19318 | |HGNC=19318 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVL6 | |UniProt=Q8IVL6 | ||
|association_with_transcript=0bp_to_ENST00000251761,ENST00000396725,NM_014262,uc001qra.1_5end | |||
|cluster_id=chr12:6937564..6937585,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_LEPREL2_5end | |||
|id=chr12:6937564..6937585,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.76e-47!180;CL:0000183!1.75e-23!59;CL:0000680!2.29e-22!57;CL:0000056!2.29e-22!57;CL:0000355!2.29e-22!57;CL:0000187!7.81e-22!54;CL:0000222!6.77e-21!119;CL:0000393!1.10e-20!60;CL:0000211!1.10e-20!60;CL:0000057!1.04e-19!75;CL:0000192!2.99e-19!42;CL:0000514!2.99e-19!42;CL:0002321!1.03e-16!248;CL:0000220!1.45e-16!246;CL:0000359!1.26e-14!32;CL:0000144!1.87e-10!625;CL:0002371!4.39e-10!591;CL:0002494!9.06e-07!16;CL:0002620!9.48e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.09e-14;32!CL:0000192;5.34e-14;43!CL:0000187;2.47e-12;55!CL:0000393;7.98e-11;61!CL:0000211;7.98e-11;61!CL:0000134;4.73e-10;55!CL:0000723;2.08e-09;61!CL:0000048;4.19e-09;58!CL:0000057;2.25e-08;73!CL:0000034;5.96e-08;69!CL:0002320;8.04e-08;188!CL:0002494;7.87e-07;16!CL:0002620;8.20e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.27e-23,58;CL:0000056,6.27e-23,58;CL:0000355,6.27e-23,58;CL:0000187,2.19e-22,55;CL:0000222,2.14e-21,121;CL:0000393,3.15e-21,61;CL:0000211,3.15e-21,61;CL:0000057,1.78e-20,76;CL:0000192,9.46e-20,43;CL:0000514,9.46e-20,43;CL:0002321,9.09e-17,250;CL:0000359,8.26e-15,32;CL:0002494,7.65e-07,16;CL:0002620,8.01e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.34e-14;43!CL:0000355;5.56e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.61e-23!79;UBERON:0007798!2.61e-23!79;UBERON:0000914!6.98e-23!83;UBERON:0002329!6.98e-23!83;UBERON:0003077!6.98e-23!83;UBERON:0003059!6.98e-23!83;UBERON:0007282!6.98e-23!83;UBERON:0009618!6.98e-23!83;UBERON:0007285!6.98e-23!83;UBERON:0004290!2.04e-21!70;UBERON:0004872!3.73e-21!84;UBERON:0000486!4.39e-21!82;UBERON:0001134!1.70e-20!61;UBERON:0002036!1.70e-20!61;UBERON:0003082!1.70e-20!61;UBERON:0002385!6.35e-20!63;UBERON:0001015!6.35e-20!63;UBERON:0000383!6.35e-20!63;UBERON:0005256!7.48e-20!143;UBERON:0000055!6.68e-19!69;UBERON:0001981!8.60e-19!60;UBERON:0007500!8.60e-19!60;UBERON:0004537!8.60e-19!60;UBERON:0006965!8.60e-19!60;UBERON:0003914!4.93e-18!118;UBERON:0000490!1.04e-17!138;UBERON:0001637!1.95e-17!42;UBERON:0003509!1.95e-17!42;UBERON:0004572!1.95e-17!42;UBERON:0000119!4.97e-17!312;UBERON:0000483!1.09e-16!309;UBERON:0004535!2.39e-16!110;UBERON:0000475!5.87e-16!365;UBERON:0001009!1.01e-15!113;UBERON:0004573!6.05e-14!33;UBERON:0004571!6.05e-14!33;UBERON:0002100!7.80e-13!216;UBERON:0000481!1.65e-12!347;UBERON:0000468!2.22e-12!659;UBERON:0000477!1.63e-11!286;UBERON:0004111!1.63e-10!241;UBERON:0003104!5.93e-09!238;UBERON:0009142!5.93e-09!238;UBERON:0000947!8.91e-09!21;UBERON:0010191!8.91e-09!21;UBERON:0000025!9.53e-09!194;UBERON:0000467!1.34e-08!625;UBERON:0000480!1.58e-08!626;UBERON:0000922!1.83e-07!612;UBERON:0003102!3.10e-07!95;UBERON:0002050!6.99e-07!605;UBERON:0005423!6.99e-07!605;UBERON:0000923!8.47e-07!604;UBERON:0005291!8.47e-07!604;UBERON:0006598!8.47e-07!604;UBERON:0002532!8.47e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.00e-13;33!UBERON:0004571;4.00e-13;33!UBERON:0001637;4.59e-13;42!UBERON:0003509;4.59e-13;42!UBERON:0004572;4.59e-13;42!UBERON:0007500;8.97e-11;56!UBERON:0001981;8.97e-11;56!UBERON:0004537;8.97e-11;56!UBERON:0002049;8.30e-10;75!UBERON:0007798;8.30e-10;75!UBERON:0000055;1.55e-09;65!UBERON:0003914;2.63e-09;74!UBERON:0000947;6.86e-09;21!UBERON:0010191;6.86e-09;21!UBERON:0002384;2.27e-07;198!UBERON:0002385;3.97e-07;31!UBERON:0001015;3.97e-07;31!UBERON:0000383;3.97e-07;31!UBERON:0002204;7.57e-07;70 | |||
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| ||
|short_description=p1@LEPREL2 | |||
}} | }} |
Latest revision as of 04:39, 20 September 2015
Short description: | p1@LEPREL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEPREL2_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000251761, ENST00000396725, NM_014262, uc001qra.1_5end |
EntrezGene: | LEPREL2 |
HGNC: | 19318 |
UniProt: | Q8IVL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.27e-23 | 58 |
myoblast | 6.27e-23 | 58 |
multi-potent skeletal muscle stem cell | 6.27e-23 | 58 |
muscle cell | 2.19e-22 | 55 |
mesodermal cell | 2.14e-21 | 121 |
electrically responsive cell | 3.15e-21 | 61 |
electrically active cell | 3.15e-21 | 61 |
fibroblast | 1.78e-20 | 76 |
smooth muscle cell | 9.46e-20 | 43 |
smooth muscle myoblast | 9.46e-20 | 43 |
embryonic cell | 9.09e-17 | 250 |
vascular associated smooth muscle cell | 8.26e-15 | 32 |
cardiocyte | 7.65e-07 | 16 |
skin fibroblast | 8.01e-07 | 23 |