FFCP PHASE1:Hg19::chr12:6937548..6937551,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10536 | |EntrezGene=10536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19318 | |HGNC=19318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000251761_5end | |association_with_transcript=-12bp_to_ENST00000251761_5end | ||
|cluster_id=chr12:6937548..6937551,+ | |||
|description=CAGE_peak_5_at_LEPREL2_5end | |description=CAGE_peak_5_at_LEPREL2_5end | ||
|id=chr12:6937548..6937551,+ | |id=chr12:6937548..6937551,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.17e-32!180;CL:0000680!6.22e-17!57;CL:0000056!6.22e-17!57;CL:0000355!6.22e-17!57;CL:0000183!8.78e-17!59;CL:0000057!1.24e-16!75;CL:0000187!7.66e-16!54;CL:0000192!4.93e-15!42;CL:0000514!4.93e-15!42;CL:0000393!5.31e-14!60;CL:0000211!5.31e-14!60;CL:0000222!4.65e-13!119;CL:0000359!1.31e-10!32;CL:0002620!4.73e-08!23;CL:0002321!6.39e-07!248 | |ontology_enrichment_celltype=CL:0000055!3.17e-32!180;CL:0000680!6.22e-17!57;CL:0000056!6.22e-17!57;CL:0000355!6.22e-17!57;CL:0000183!8.78e-17!59;CL:0000057!1.24e-16!75;CL:0000187!7.66e-16!54;CL:0000192!4.93e-15!42;CL:0000514!4.93e-15!42;CL:0000393!5.31e-14!60;CL:0000211!5.31e-14!60;CL:0000222!4.65e-13!119;CL:0000359!1.31e-10!32;CL:0002620!4.73e-08!23;CL:0002321!6.39e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000134;9.73e-10;55!CL:0000048;1.10e-08;58!CL:0000723;2.62e-08;61!CL:0002539;3.97e-08;10!CL:0000569;3.13e-07;4!CL:0000192;6.18e-07;43!CL:0000359;6.87e-07;32 | |ontology_enrichment_celltype_v019=CL:0000134;9.73e-10;55!CL:0000048;1.10e-08;58!CL:0000723;2.62e-08;61!CL:0002539;3.97e-08;10!CL:0000569;3.13e-07;4!CL:0000192;6.18e-07;43!CL:0000359;6.87e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.33e-13,76;CL:0000048,3.59e-11,427;CL:0000723,1.05e-10,433;CL:0000034,4.18e-10,441;CL:0000192,2.21e-09,43;CL:0000514,2.21e-09,43;CL:0002539,3.41e-08,10;CL:0000680,4.99e-08,58;CL:0000056,4.99e-08,58;CL:0000355,4.99e-08,58;CL:0000359,3.85e-07,32;CL:0000187,4.35e-07,55;CL:0000569,5.34e-07,4;CL:0000011,5.34e-07,4;CL:0002320,9.22e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000011;3.13e-07;4!CL:0000514;6.18e-07;43 | |ontology_enrichment_development_v019=CL:0000011;3.13e-07;4!CL:0000514;6.18e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.52e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;2.52e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,7.19e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.11e-15!83;UBERON:0002329!3.11e-15!83;UBERON:0003077!3.11e-15!83;UBERON:0003059!3.11e-15!83;UBERON:0007282!3.11e-15!83;UBERON:0009618!3.11e-15!83;UBERON:0007285!3.11e-15!83;UBERON:0001134!2.61e-14!61;UBERON:0002036!2.61e-14!61;UBERON:0003082!2.61e-14!61;UBERON:0002385!7.72e-14!63;UBERON:0001015!7.72e-14!63;UBERON:0000383!7.72e-14!63;UBERON:0004290!1.29e-13!70;UBERON:0000486!1.51e-13!82;UBERON:0002049!8.24e-13!79;UBERON:0007798!8.24e-13!79;UBERON:0004872!3.05e-12!84;UBERON:0001637!4.81e-12!42;UBERON:0003509!4.81e-12!42;UBERON:0004572!4.81e-12!42;UBERON:0000490!5.30e-11!138;UBERON:0001981!2.25e-10!60;UBERON:0007500!2.25e-10!60;UBERON:0004537!2.25e-10!60;UBERON:0006965!2.25e-10!60;UBERON:0004573!4.19e-10!33;UBERON:0004571!4.19e-10!33;UBERON:0000055!1.99e-09!69;UBERON:0000468!2.62e-09!659;UBERON:0005256!8.63e-09!143;UBERON:0004535!1.46e-08!110;UBERON:0000475!1.49e-08!365;UBERON:0000947!1.94e-08!21;UBERON:0010191!1.94e-08!21;UBERON:0000483!2.82e-08!309;UBERON:0000119!4.24e-08!312;UBERON:0001009!9.93e-08!113;UBERON:0002100!7.86e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!3.11e-15!83;UBERON:0002329!3.11e-15!83;UBERON:0003077!3.11e-15!83;UBERON:0003059!3.11e-15!83;UBERON:0007282!3.11e-15!83;UBERON:0009618!3.11e-15!83;UBERON:0007285!3.11e-15!83;UBERON:0001134!2.61e-14!61;UBERON:0002036!2.61e-14!61;UBERON:0003082!2.61e-14!61;UBERON:0002385!7.72e-14!63;UBERON:0001015!7.72e-14!63;UBERON:0000383!7.72e-14!63;UBERON:0004290!1.29e-13!70;UBERON:0000486!1.51e-13!82;UBERON:0002049!8.24e-13!79;UBERON:0007798!8.24e-13!79;UBERON:0004872!3.05e-12!84;UBERON:0001637!4.81e-12!42;UBERON:0003509!4.81e-12!42;UBERON:0004572!4.81e-12!42;UBERON:0000490!5.30e-11!138;UBERON:0001981!2.25e-10!60;UBERON:0007500!2.25e-10!60;UBERON:0004537!2.25e-10!60;UBERON:0006965!2.25e-10!60;UBERON:0004573!4.19e-10!33;UBERON:0004571!4.19e-10!33;UBERON:0000055!1.99e-09!69;UBERON:0000468!2.62e-09!659;UBERON:0005256!8.63e-09!143;UBERON:0004535!1.46e-08!110;UBERON:0000475!1.49e-08!365;UBERON:0000947!1.94e-08!21;UBERON:0010191!1.94e-08!21;UBERON:0000483!2.82e-08!309;UBERON:0000119!4.24e-08!312;UBERON:0001009!9.93e-08!113;UBERON:0002100!7.86e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.97e-08;10!UBERON:0004695;3.97e-08;10!UBERON:0002111;3.97e-08;10!UBERON:0004178;3.97e-08;10!UBERON:0000947;4.94e-08;21!UBERON:0010191;4.94e-08;21!UBERON:0001637;4.06e-07;42!UBERON:0003509;4.06e-07;42!UBERON:0004572;4.06e-07;42!UBERON:0004573;4.63e-07;33!UBERON:0004571;4.63e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004237;3.97e-08;10!UBERON:0004695;3.97e-08;10!UBERON:0002111;3.97e-08;10!UBERON:0004178;3.97e-08;10!UBERON:0000947;4.94e-08;21!UBERON:0010191;4.94e-08;21!UBERON:0001637;4.06e-07;42!UBERON:0003509;4.06e-07;42!UBERON:0004572;4.06e-07;42!UBERON:0004573;4.63e-07;33!UBERON:0004571;4.63e-07;33 | ||
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| ||
|short_description=p5@LEPREL2 | |short_description=p5@LEPREL2 | ||
}} | }} |
Latest revision as of 04:39, 20 September 2015
Short description: | p5@LEPREL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LEPREL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000251761_5end |
EntrezGene: | LEPREL2 |
HGNC: | 19318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.33e-13 | 76 |
multi fate stem cell | 3.59e-11 | 427 |
somatic stem cell | 1.05e-10 | 433 |
stem cell | 4.18e-10 | 441 |
smooth muscle cell | 2.21e-09 | 43 |
smooth muscle myoblast | 2.21e-09 | 43 |
aortic smooth muscle cell | 3.41e-08 | 10 |
muscle precursor cell | 4.99e-08 | 58 |
myoblast | 4.99e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.99e-08 | 58 |
vascular associated smooth muscle cell | 3.85e-07 | 32 |
muscle cell | 4.35e-07 | 55 |
cardiac mesenchymal cell | 5.34e-07 | 4 |
migratory trunk neural crest cell | 5.34e-07 | 4 |
connective tissue cell | 9.22e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
artery | 1.07e-08 | 42 |
arterial blood vessel | 1.07e-08 | 42 |
arterial system | 1.07e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 2.53e-08 | 83 |
blood vessel smooth muscle | 3.41e-08 | 10 |
arterial system smooth muscle | 3.41e-08 | 10 |
artery smooth muscle tissue | 3.41e-08 | 10 |
aorta smooth muscle tissue | 3.41e-08 | 10 |
aorta | 5.95e-08 | 21 |
aortic system | 5.95e-08 | 21 |
epithelial vesicle | 2.30e-07 | 78 |
systemic artery | 3.53e-07 | 33 |
systemic arterial system | 3.53e-07 | 33 |
skeletal muscle tissue | 3.62e-07 | 62 |
striated muscle tissue | 3.62e-07 | 62 |
myotome | 3.62e-07 | 62 |
connective tissue | 6.53e-07 | 371 |
muscle tissue | 8.81e-07 | 64 |
musculature | 8.81e-07 | 64 |
musculature of body | 8.81e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.19e-11 | 14 |