FFCP PHASE1:Hg19::chr17:39316998..39317001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84616 | |EntrezGene=84616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16928 | |HGNC=16928 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYR3 | |UniProt=Q9BYR3 | ||
|association_with_transcript=-15bp_to_ENST00000390661,NM_032524,uc002hwc.2_5end | |association_with_transcript=-15bp_to_ENST00000390661,NM_032524,uc002hwc.2_5end | ||
|cluster_id=chr17:39316998..39317001,- | |||
|coexpression_cluster_id=C208 | |coexpression_cluster_id=C208 | ||
|description=CAGE_peak_1_at_KRTAP4-4_5end | |description=CAGE_peak_1_at_KRTAP4-4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000946!8.72e-18!1;CL:0000786!8.72e-18!1;CL:0000980!8.72e-18!1;CL:0000785!1.44e-09!2;CL:0000955!1.44e-09!2;CL:0000818!1.44e-09!2;CL:0000954!1.44e-09!2;CL:0000816!1.44e-09!2;CL:0000817!8.62e-07!3 | |ontology_enrichment_celltype=CL:0000946!8.72e-18!1;CL:0000786!8.72e-18!1;CL:0000980!8.72e-18!1;CL:0000785!1.44e-09!2;CL:0000955!1.44e-09!2;CL:0000818!1.44e-09!2;CL:0000954!1.44e-09!2;CL:0000816!1.44e-09!2;CL:0000817!8.62e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.55e-98;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.55e-98;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!2.66e-18!1;UBERON:0002331!1.20e-07!10;UBERON:0000358!1.20e-07!10;UBERON:0000307!1.20e-07!10;UBERON:0000091!1.20e-07!10;UBERON:0000087!1.20e-07!10;UBERON:0007806!1.20e-07!10;UBERON:0008780!1.20e-07!10;UBERON:0005728!1.20e-07!10;UBERON:0002240!7.28e-07!3;UBERON:0009722!7.37e-07!11;UBERON:0007690!7.37e-07!11 | |ontology_enrichment_uberon=UBERON:0007029!2.66e-18!1;UBERON:0002331!1.20e-07!10;UBERON:0000358!1.20e-07!10;UBERON:0000307!1.20e-07!10;UBERON:0000091!1.20e-07!10;UBERON:0000087!1.20e-07!10;UBERON:0007806!1.20e-07!10;UBERON:0008780!1.20e-07!10;UBERON:0005728!1.20e-07!10;UBERON:0002240!7.28e-07!3;UBERON:0009722!7.37e-07!11;UBERON:0007690!7.37e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;9.37e-99;1!UBERON:0000014;5.56e-26;4!UBERON:0002331;3.02e-11;10!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0007029;9.37e-99;1!UBERON:0000014;5.56e-26;4!UBERON:0002331;3.02e-11;10!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,9.37e-99,1;UBERON:0000014,5.56e-26,4;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10;UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p1@KRTAP4-4 | |short_description=p1@KRTAP4-4 | ||
}} | }} |
Latest revision as of 04:37, 20 September 2015
Short description: | p1@KRTAP4-4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP4-4_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -15bp_to_ENST00000390661, NM_032524, uc002hwc.2_5end |
EntrezGene: | KRTAP4-4 |
HGNC: | 16928 |
UniProt: | Q9BYR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 9.37e-99 | 1 |
zone of skin | 5.56e-26 | 4 |
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |