FFCP PHASE1:Hg19::chr19:56879534..56879615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=147947 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=25393 | |HGNC=25393 | ||
|UniProt= | |TSSclassifier=strong | ||
|UniProt=NA | |||
|association_with_transcript=0bp_to_ENST00000468396_5end | |association_with_transcript=0bp_to_ENST00000468396_5end | ||
|cluster_id=chr19:56879534..56879615,+ | |||
|description=CAGE_peak_3_at_ZNF542_5end | |description=CAGE_peak_3_at_ZNF542_5end | ||
|id=chr19:56879534..56879615,+ | |id=chr19:56879534..56879615,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.42e-07;6!CL:0000404;3.42e-07;6 | |ontology_enrichment_celltype_v019=CL:0000540;3.42e-07;6!CL:0000404;3.42e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.37e-08,8;CL:0000540,3.97e-07,6;CL:0000031,3.97e-07,6;CL:0000404,3.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.42e-07;6 | |ontology_enrichment_development_v019=CL:0000031;3.42e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.46e-12!115;UBERON:0005743!1.70e-11!86;UBERON:0000073!4.67e-11!94;UBERON:0001016!4.67e-11!94;UBERON:0001017!1.49e-10!82;UBERON:0001049!1.81e-09!57;UBERON:0005068!1.81e-09!57;UBERON:0006241!1.81e-09!57;UBERON:0007135!1.81e-09!57;UBERON:0002616!2.34e-09!59;UBERON:0003080!6.36e-08!42;UBERON:0002780!6.54e-08!41;UBERON:0001890!6.54e-08!41;UBERON:0006240!6.54e-08!41;UBERON:0002020!2.31e-07!34;UBERON:0003528!2.31e-07!34;UBERON:0003075!2.72e-07!86;UBERON:0007284!2.72e-07!86;UBERON:0002346!3.75e-07!90;UBERON:0001893!5.19e-07!34;UBERON:0000955!5.59e-07!69;UBERON:0006238!5.59e-07!69;UBERON:0001869!6.02e-07!32;UBERON:0004121!9.65e-07!169;UBERON:0002791!9.67e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!7.46e-12!115;UBERON:0005743!1.70e-11!86;UBERON:0000073!4.67e-11!94;UBERON:0001016!4.67e-11!94;UBERON:0001017!1.49e-10!82;UBERON:0001049!1.81e-09!57;UBERON:0005068!1.81e-09!57;UBERON:0006241!1.81e-09!57;UBERON:0007135!1.81e-09!57;UBERON:0002616!2.34e-09!59;UBERON:0003080!6.36e-08!42;UBERON:0002780!6.54e-08!41;UBERON:0001890!6.54e-08!41;UBERON:0006240!6.54e-08!41;UBERON:0002020!2.31e-07!34;UBERON:0003528!2.31e-07!34;UBERON:0003075!2.72e-07!86;UBERON:0007284!2.72e-07!86;UBERON:0002346!3.75e-07!90;UBERON:0001893!5.19e-07!34;UBERON:0000955!5.59e-07!69;UBERON:0006238!5.59e-07!69;UBERON:0001869!6.02e-07!32;UBERON:0004121!9.65e-07!169;UBERON:0002791!9.67e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.57e-07;15!UBERON:0000179;3.57e-07;15!UBERON:0000463;3.57e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.57e-07;15!UBERON:0000179;3.57e-07;15!UBERON:0000463;3.57e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.26e-10,81;UBERON:0001016,1.86e-09,89;UBERON:0001049,4.16e-08,56;UBERON:0005068,4.16e-08,56;UBERON:0006241,4.16e-08,56;UBERON:0007135,4.16e-08,56;UBERON:0007023,6.53e-08,114;UBERON:0000073,1.49e-07,53;UBERON:0002616,1.49e-07,53;UBERON:0000178,6.10e-07,15;UBERON:0000179,6.10e-07,15;UBERON:0000463,6.10e-07,15 | |||
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| ||
|short_description=p3@ZNF542 | |short_description=p3@ZNF542 | ||
}} | }} |
Latest revision as of 04:10, 20 September 2015
Short description: | p3@ZNF542 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF542_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468396_5end |
EntrezGene: | ZNF542 |
HGNC: | 25393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.37e-08 | 8 |
neuron | 3.97e-07 | 6 |
neuroblast | 3.97e-07 | 6 |
electrically signaling cell | 3.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.26e-10 | 81 |
nervous system | 1.86e-09 | 89 |
neural tube | 4.16e-08 | 56 |
neural rod | 4.16e-08 | 56 |
future spinal cord | 4.16e-08 | 56 |
neural keel | 4.16e-08 | 56 |
adult organism | 6.53e-08 | 114 |
regional part of nervous system | 1.49e-07 | 53 |
regional part of brain | 1.49e-07 | 53 |
blood | 6.10e-07 | 15 |
haemolymphatic fluid | 6.10e-07 | 15 |
organism substance | 6.10e-07 | 15 |