FFCP PHASE1:Hg19::chr5:130727843..130727862,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:130727843..130727862,+
|short_description=p5@CDC42SE2
|description=CAGE_peak_5_at_CDC42SE2_5end
|association_with_transcript=-31bp_to_ENST00000506929_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56990 | |EntrezGene=56990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18547 | |HGNC=18547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000506929_5end | |||
|cluster_id=chr5:130727843..130727862,+ | |||
|description=CAGE_peak_5_at_CDC42SE2_5end | |||
|id=chr5:130727843..130727862,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.05e-29!140;CL:0000037!1.16e-27!172;CL:0000566!1.16e-27!172;CL:0002087!2.53e-27!119;CL:0002032!3.02e-27!165;CL:0000837!3.02e-27!165;CL:0002031!1.06e-25!124;CL:0000988!9.57e-24!182;CL:0000542!9.16e-15!53;CL:0000051!9.16e-15!53;CL:0000838!1.77e-14!52;CL:0000766!3.15e-14!76;CL:0000763!5.10e-13!112;CL:0000049!5.10e-13!112;CL:0000839!5.14e-12!70;CL:0002057!6.80e-12!42;CL:0002194!7.40e-12!63;CL:0000576!7.40e-12!63;CL:0000040!7.40e-12!63;CL:0000559!7.40e-12!63;CL:0002009!1.48e-11!65;CL:0000557!1.71e-11!71;CL:0000860!6.59e-11!45;CL:0000791!1.37e-08!18;CL:0000789!1.37e-08!18;CL:0002420!1.37e-08!18;CL:0002419!1.37e-08!18;CL:0000790!1.37e-08!18;CL:0000084!3.30e-08!25;CL:0000827!3.30e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.35e-12;33!CL:0002057;6.35e-12;33!CL:0000791;2.31e-11;18!CL:0000789;2.31e-11;18!CL:0002419;2.31e-11;18!CL:0000542;4.67e-11;53!CL:0000084;2.16e-10;25!CL:0002087;7.64e-10;104!CL:0000473;1.02e-09;39!CL:0000234;1.02e-09;39!CL:0000738;2.07e-08;136!CL:0000576;3.09e-08;48!CL:0000625;2.53e-07;11!CL:0000945;9.12e-07;24!CL:0000766;9.34e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.21e-36,136;CL:0002087,5.96e-33,115;CL:0002031,3.84e-31,120;CL:0000037,4.56e-30,168;CL:0002032,7.37e-29,161;CL:0000837,7.37e-29,161;CL:0000988,6.24e-27,177;CL:0000542,3.93e-19,53;CL:0000051,3.93e-19,53;CL:0000838,1.15e-18,52;CL:0000766,1.99e-16,72;CL:0000557,2.08e-13,67;CL:0000860,3.93e-13,42;CL:0002057,3.93e-13,42;CL:0002009,4.11e-13,61;CL:0002194,4.83e-13,59;CL:0000576,4.83e-13,59;CL:0000040,4.83e-13,59;CL:0000559,4.83e-13,59;CL:0000839,6.15e-13,66;CL:0000473,1.18e-12,48;CL:0000234,1.18e-12,48;CL:0000791,7.98e-12,18;CL:0000789,7.98e-12,18;CL:0002420,7.98e-12,18;CL:0002419,7.98e-12,18;CL:0000790,7.98e-12,18;CL:0000763,1.47e-11,108;CL:0000049,1.47e-11,108;CL:0000084,1.29e-10,25;CL:0000827,1.29e-10,25;CL:0000625,1.90e-07,11;CL:0000945,6.20e-07,24;CL:0000826,6.20e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-11;18!CL:0000051;4.67e-11;53!CL:0002057;2.37e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-12!102;UBERON:0003061!2.70e-12!102;UBERON:0002193!8.49e-11!112;UBERON:0002371!3.27e-09!80;UBERON:0001474!2.55e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-14,98;UBERON:0003061,1.17e-14,98;UBERON:0002193,2.38e-13,108;UBERON:0002371,6.02e-12,76;UBERON:0002405,6.86e-11,93;UBERON:0001474,3.64e-10,82;UBERON:0004765,3.20e-08,90;UBERON:0001434,7.60e-07,100 | |||
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| ||
|short_description=p5@CDC42SE2 | |||
}} | }} |
Latest revision as of 03:54, 20 September 2015
Short description: | p5@CDC42SE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDC42SE2_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000506929_5end |
EntrezGene: | CDC42SE2 |
HGNC: | 18547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-14 | 98 |
blood island | 1.17e-14 | 98 |
hemolymphoid system | 2.38e-13 | 108 |
bone marrow | 6.02e-12 | 76 |
immune system | 6.86e-11 | 93 |
bone element | 3.64e-10 | 82 |
skeletal element | 3.20e-08 | 90 |
skeletal system | 7.60e-07 | 100 |