FFCP PHASE1:Hg19::chr18:61034772..61034800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2531 | |EntrezGene=2531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4021 | |HGNC=4021 | ||
|TSSclassifier=strong | |||
|UniProt=Q06136 | |UniProt=Q06136 | ||
|association_with_transcript=-29bp_to_ENST00000406396_5end | |association_with_transcript=-29bp_to_ENST00000406396_5end | ||
|cluster_id=chr18:61034772..61034800,- | |||
|description=CAGE_peak_2_at_KDSR_5end | |description=CAGE_peak_2_at_KDSR_5end | ||
|id=chr18:61034772..61034800,- | |id=chr18:61034772..61034800,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!5.43e-20!511;UBERON:0000468!1.45e-18!659;UBERON:0007023!8.51e-18!115;UBERON:0000924!8.18e-17!173;UBERON:0006601!8.18e-17!173;UBERON:0004121!3.91e-15!169;UBERON:0000467!3.23e-14!625;UBERON:0000480!5.60e-14!626;UBERON:0000922!2.20e-13!612;UBERON:0002050!2.77e-13!605;UBERON:0005423!2.77e-13!605;UBERON:0000923!4.80e-13!604;UBERON:0005291!4.80e-13!604;UBERON:0006598!4.80e-13!604;UBERON:0002532!4.80e-13!604;UBERON:0000475!6.10e-13!365;UBERON:0002346!5.87e-11!90;UBERON:0000033!2.03e-10!123;UBERON:0000153!1.65e-09!129;UBERON:0007811!1.65e-09!129;UBERON:0003075!2.54e-09!86;UBERON:0007284!2.54e-09!86;UBERON:0001049!4.23e-09!57;UBERON:0005068!4.23e-09!57;UBERON:0006241!4.23e-09!57;UBERON:0007135!4.23e-09!57;UBERON:0000073!2.99e-08!94;UBERON:0001016!2.99e-08!94;UBERON:0002616!6.73e-08!59;UBERON:0005743!1.24e-07!86;UBERON:0001017!1.67e-07!82;UBERON:0000955!1.80e-07!69;UBERON:0006238!1.80e-07!69;UBERON:0000481!5.42e-07!347;UBERON:0003056!7.65e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-17,114;UBERON:0004121,3.15e-17,171;UBERON:0000924,3.15e-17,171;UBERON:0006601,3.15e-17,171;UBERON:0005423,6.52e-12,581;UBERON:0010371,7.36e-12,104;UBERON:0000922,1.31e-11,592;UBERON:0002346,1.39e-11,86;UBERON:0002050,2.47e-11,564;UBERON:0000923,2.60e-11,560;UBERON:0010316,2.60e-11,560;UBERON:0005291,2.60e-11,560;UBERON:0006598,2.60e-11,560;UBERON:0010317,2.60e-11,560;UBERON:0002532,2.60e-11,560;UBERON:0003075,7.01e-10,82;UBERON:0007284,7.01e-10,82;UBERON:0011216,1.36e-09,223;UBERON:0001049,1.19e-08,56;UBERON:0005068,1.19e-08,56;UBERON:0006241,1.19e-08,56;UBERON:0007135,1.19e-08,56;UBERON:0010314,1.99e-08,132;UBERON:0001016,9.17e-08,89;UBERON:0000073,1.81e-07,53;UBERON:0002616,1.81e-07,53;UBERON:0001017,3.73e-07,81;UBERON:0000955,4.20e-07,68;UBERON:0006238,4.20e-07,68;UBERON:0003056,7.29e-07,61 | |||
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| ||
|short_description=p2@KDSR | |short_description=p2@KDSR | ||
}} | }} |
Latest revision as of 03:50, 20 September 2015
Short description: | p2@KDSR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KDSR_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000406396_5end |
EntrezGene: | KDSR |
HGNC: | 4021 |
UniProt: | Q06136 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-17 | 114 |
ectoderm-derived structure | 3.15e-17 | 171 |
ectoderm | 3.15e-17 | 171 |
presumptive ectoderm | 3.15e-17 | 171 |
developing anatomical structure | 6.52e-12 | 581 |
ecto-epithelium | 7.36e-12 | 104 |
embryo | 1.31e-11 | 592 |
neurectoderm | 1.39e-11 | 86 |
embryonic structure | 2.47e-11 | 564 |
germ layer | 2.60e-11 | 560 |
germ layer / neural crest | 2.60e-11 | 560 |
embryonic tissue | 2.60e-11 | 560 |
presumptive structure | 2.60e-11 | 560 |
germ layer / neural crest derived structure | 2.60e-11 | 560 |
epiblast (generic) | 2.60e-11 | 560 |
neural plate | 7.01e-10 | 82 |
presumptive neural plate | 7.01e-10 | 82 |
organ system subdivision | 1.36e-09 | 223 |
neural tube | 1.19e-08 | 56 |
neural rod | 1.19e-08 | 56 |
future spinal cord | 1.19e-08 | 56 |
neural keel | 1.19e-08 | 56 |
structure with developmental contribution from neural crest | 1.99e-08 | 132 |
nervous system | 9.17e-08 | 89 |
regional part of nervous system | 1.81e-07 | 53 |
regional part of brain | 1.81e-07 | 53 |
central nervous system | 3.73e-07 | 81 |
brain | 4.20e-07 | 68 |
future brain | 4.20e-07 | 68 |
pre-chordal neural plate | 7.29e-07 | 61 |