FFCP PHASE1:Hg19::chr4:103266129..103266186,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:103266129..103266186,-
|short_description=p2@SLC39A8
|description=CAGE_peak_2_at_SLC39A8_5end
|association_with_transcript=109bp_to_ENST00000394833_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64116 | |EntrezGene=64116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20862 | |HGNC=20862 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0K1 | |UniProt=Q9C0K1 | ||
|association_with_transcript=109bp_to_ENST00000394833_5end | |||
|cluster_id=chr4:103266129..103266186,- | |||
|description=CAGE_peak_2_at_SLC39A8_5end | |||
|id=chr4:103266129..103266186,- | |||
|ontology_enrichment_celltype=CL:0000037!9.00e-20!172;CL:0000566!9.00e-20!172;CL:0002032!3.96e-19!165;CL:0000837!3.96e-19!165;CL:0000988!1.03e-17!182;CL:0002031!6.24e-14!124;CL:0000542!9.15e-14!53;CL:0000051!9.15e-14!53;CL:0002087!1.24e-13!119;CL:0000838!2.91e-13!52;CL:0000738!5.84e-12!140;CL:0000048!1.10e-11!430;CL:0000723!1.74e-10!436;CL:0000034!2.12e-10!444;CL:0000134!2.19e-10!358;CL:0002320!9.97e-10!365;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112;CL:0000219!5.85e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.69e-08;53!CL:0000084;4.33e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.08e-19,168;CL:0002032,1.23e-18,161;CL:0000837,1.23e-18,161;CL:0000988,9.78e-18,177;CL:0000542,4.27e-14,53;CL:0000051,4.27e-14,53;CL:0000838,1.42e-13,52;CL:0002031,2.62e-13,120;CL:0002087,7.28e-13,115;CL:0000738,7.85e-12,136;CL:0000048,1.56e-10,427;CL:0000134,5.62e-10,354;CL:0000723,1.58e-09,433;CL:0000034,1.99e-09,441;CL:0002320,3.32e-09,361;CL:0000763,4.98e-07,108;CL:0000049,4.98e-07,108;CL:0000084,5.53e-07,25;CL:0000827,5.53e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;6.69e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!1.13e-12!51;DOID:0060083!1.13e-12!51;DOID:1240!3.70e-10!39;DOID:8692!2.41e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.58e-09;31!DOID:1240;1.82e-08;39!DOID:2531;6.24e-08;51!DOID:0060083;6.24e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.32e-12,51;DOID:0060083,2.32e-12,51;DOID:1240,6.23e-10,39;DOID:8692,5.26e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.49e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.48e-09,371 | |||
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| ||
|short_description=p2@SLC39A8 | |||
}} | }} |
Latest revision as of 03:40, 20 September 2015
Short description: | p2@SLC39A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC39A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_ENST00000394833_5end |
EntrezGene: | SLC39A8 |
HGNC: | 20862 |
UniProt: | Q9C0K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.08e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.23e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-18 | 161 |
hematopoietic cell | 9.78e-18 | 177 |
lymphocyte | 4.27e-14 | 53 |
common lymphoid progenitor | 4.27e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.42e-13 | 52 |
hematopoietic lineage restricted progenitor cell | 2.62e-13 | 120 |
nongranular leukocyte | 7.28e-13 | 115 |
leukocyte | 7.85e-12 | 136 |
multi fate stem cell | 1.56e-10 | 427 |
mesenchymal cell | 5.62e-10 | 354 |
somatic stem cell | 1.58e-09 | 433 |
stem cell | 1.99e-09 | 441 |
connective tissue cell | 3.32e-09 | 361 |
myeloid cell | 4.98e-07 | 108 |
common myeloid progenitor | 4.98e-07 | 108 |
T cell | 5.53e-07 | 25 |
pro-T cell | 5.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.48e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.32e-12 | 51 |
immune system cancer | 2.32e-12 | 51 |
leukemia | 6.23e-10 | 39 |
myeloid leukemia | 5.26e-09 | 31 |