FFCP PHASE1:Hg19::chr10:97182014..97182028,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14565 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-184bp_to_uc001kkl.2_5end | |||
|cluster_id=chr10:97182014..97182028,- | |||
|coexpression_cluster_id=C2085 | |||
|description=CAGE_peak_17_at_SORBS1_5end | |||
|id=chr10:97182014..97182028,- | |||
|ontology_enrichment_celltype=CL:0000148!5.11e-13!10;CL:0000541!5.11e-13!10;CL:0002567!3.71e-09!3;CL:0000147!6.43e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.27e-51;10!CL:0000147;1.90e-36;14!CL:0002567;2.16e-32;3!CL:0000710;2.35e-25;20!CL:0000075;1.25e-18;27!CL:0002077;4.82e-13;34!CL:0002566;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.41e-51,10;CL:0000541,3.41e-51,10;CL:0000147,1.96e-36,14;CL:0002567,2.68e-32,3;CL:0000710,2.40e-25,20;CL:0000075,1.27e-18,27;CL:0002077,1.16e-14,34;CL:0002566,7.76e-12,1;CL:0000333,1.87e-11,41;CL:0000133,7.19e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.29e-15;3!UBERON:0003057;9.29e-15;3!UBERON:0010227;3.85e-12;1!UBERON:0001045;1.07e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-43!115;UBERON:0001049!5.35e-13!57;UBERON:0005068!5.35e-13!57;UBERON:0006241!5.35e-13!57;UBERON:0007135!5.35e-13!57;UBERON:0003075!5.14e-12!86;UBERON:0007284!5.14e-12!86;UBERON:0002346!3.41e-11!90;UBERON:0005743!1.36e-10!86;UBERON:0001017!3.38e-10!82;UBERON:0003076!1.13e-09!15;UBERON:0003057!1.13e-09!15;UBERON:0000073!4.91e-09!94;UBERON:0001016!4.91e-09!94;UBERON:0002240!7.12e-09!3;UBERON:0002616!2.11e-08!59;UBERON:0001896!3.07e-08!3;UBERON:0005290!3.07e-08!3;UBERON:0010096!3.07e-08!3;UBERON:0002298!1.04e-07!8;UBERON:0004121!1.53e-07!169;UBERON:0000924!3.41e-07!173;UBERON:0006601!3.41e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;9.29e-15;3!UBERON:0005174;9.29e-15;3!UBERON:0001137;9.29e-15;3!UBERON:0002079;3.85e-12;1!UBERON:0007029;1.07e-11;1!UBERON:0002038;1.07e-11;1!UBERON:0001154;1.07e-11;1!UBERON:0001153;1.07e-11;1!UBERON:0009854;1.07e-11;1!UBERON:0009661;1.07e-11;1!UBERON:0002950;1.07e-11;1!UBERON:0001891;1.07e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,8.67e-15,3;UBERON:0005174,8.67e-15,3;UBERON:0001137,8.67e-15,3;UBERON:0002079,2.63e-12,1;UBERON:0007029,6.26e-12,1;UBERON:0002038,1.19e-11,1;UBERON:0009661,1.19e-11,1;UBERON:0002950,1.19e-11,1;UBERON:0001891,1.19e-11,1;UBERON:0009616,1.19e-11,1;UBERON:0010286,1.19e-11,1;UBERON:0001154,1.81e-11,1;UBERON:0001153,1.81e-11,1;UBERON:0001045,1.81e-11,1;UBERON:0002081,8.93e-07,2;UBERON:0010227,8.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,1.71444314588856,2.29193055334967,2.34434894420094,1.71072446022705,2.77634230298973,2.40274446275134,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.606610196826093,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.332787154610557,0.745156835296601,0,0,0.303298235083296,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0,0.39246546425257,0,0,0.913158720509496,0,0,2.43020250200632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.308696632431779,0,0,0.735444965261716,0,1.76677620403451,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0.458729283404541,1.57673541466596,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.310298987585686,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0 | |||
|short_description=p17@SORBS1 | |||
}} |
Latest revision as of 03:37, 20 September 2015
Short description: | p17@SORBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SORBS1_5end |
Coexpression cluster: | C2085_Melanocyte_melanoma_retina_substantia_spinal_left_vagina |
Association with transcript: | -184bp_to_uc001kkl.2_5end |
EntrezGene: | SORBS1 |
HGNC: | 14565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.41e-51 | 10 |
melanoblast | 3.41e-51 | 10 |
pigment cell | 1.96e-36 | 14 |
light melanocyte | 2.68e-32 | 3 |
neurecto-epithelial cell | 2.40e-25 | 20 |
columnar/cuboidal epithelial cell | 1.27e-18 | 27 |
ecto-epithelial cell | 1.16e-14 | 34 |
dark melanocyte | 7.76e-12 | 1 |
migratory neural crest cell | 1.87e-11 | 41 |
neurectodermal cell | 7.19e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 8.67e-15 | 3 |
dorsal region element | 8.67e-15 | 3 |
dorsum | 8.67e-15 | 3 |
left cardiac atrium | 2.63e-12 | 1 |
surface | 6.26e-12 | 1 |
substantia nigra | 1.19e-11 | 1 |
midbrain nucleus | 1.19e-11 | 1 |
regional part of midbrain | 1.19e-11 | 1 |
midbrain | 1.19e-11 | 1 |
presumptive midbrain | 1.19e-11 | 1 |
midbrain neural tube | 1.19e-11 | 1 |
vermiform appendix | 1.81e-11 | 1 |
caecum | 1.81e-11 | 1 |
midgut | 1.81e-11 | 1 |
cardiac atrium | 8.93e-07 | 2 |
future cardiac atrium | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.96e-07 | 2 |