FFCP PHASE1:Hg19::chr5:130588762..130588773,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56990 | |EntrezGene=56990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18547 | |HGNC=18547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000515533_5end | |association_with_transcript=16bp_to_ENST00000515533_5end | ||
|cluster_id=chr5:130588762..130588773,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_16_at_CDC42SE2_5end | |description=CAGE_peak_16_at_CDC42SE2_5end | ||
|id=chr5:130588762..130588773,+ | |id=chr5:130588762..130588773,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.02e-43!140;CL:0000037!1.21e-42!172;CL:0000566!1.21e-42!172;CL:0002032!9.05e-41!165;CL:0000837!9.05e-41!165;CL:0000988!3.84e-39!182;CL:0002031!8.46e-34!124;CL:0000791!1.80e-33!18;CL:0000789!1.80e-33!18;CL:0002420!1.80e-33!18;CL:0002419!1.80e-33!18;CL:0000790!1.80e-33!18;CL:0002087!3.17e-33!119;CL:0000084!1.74e-27!25;CL:0000827!1.74e-27!25;CL:0000838!6.59e-25!52;CL:0000542!2.92e-24!53;CL:0000051!2.92e-24!53;CL:0000625!4.10e-21!11;CL:0000766!3.16e-19!76;CL:0000763!2.13e-17!112;CL:0000049!2.13e-17!112;CL:0000094!8.57e-16!8;CL:0000624!1.46e-12!6;CL:0000839!1.07e-11!70;CL:0000134!3.24e-11!358;CL:0000081!5.50e-11!11;CL:0002320!1.22e-10!365;CL:0002057!1.74e-10!42;CL:0000557!1.87e-10!71;CL:0000860!1.84e-09!45;CL:0000219!1.23e-08!390;CL:0002194!1.45e-08!63;CL:0000576!1.45e-08!63;CL:0000040!1.45e-08!63;CL:0000559!1.45e-08!63;CL:0002009!3.90e-08!65;CL:0000775!2.40e-07!3;CL:0000898!4.12e-07!3;CL:0000623!7.42e-07!3;CL:0000825!7.42e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.02e-43!140;CL:0000037!1.21e-42!172;CL:0000566!1.21e-42!172;CL:0002032!9.05e-41!165;CL:0000837!9.05e-41!165;CL:0000988!3.84e-39!182;CL:0002031!8.46e-34!124;CL:0000791!1.80e-33!18;CL:0000789!1.80e-33!18;CL:0002420!1.80e-33!18;CL:0002419!1.80e-33!18;CL:0000790!1.80e-33!18;CL:0002087!3.17e-33!119;CL:0000084!1.74e-27!25;CL:0000827!1.74e-27!25;CL:0000838!6.59e-25!52;CL:0000542!2.92e-24!53;CL:0000051!2.92e-24!53;CL:0000625!4.10e-21!11;CL:0000766!3.16e-19!76;CL:0000763!2.13e-17!112;CL:0000049!2.13e-17!112;CL:0000094!8.57e-16!8;CL:0000624!1.46e-12!6;CL:0000839!1.07e-11!70;CL:0000134!3.24e-11!358;CL:0000081!5.50e-11!11;CL:0002320!1.22e-10!365;CL:0002057!1.74e-10!42;CL:0000557!1.87e-10!71;CL:0000860!1.84e-09!45;CL:0000219!1.23e-08!390;CL:0002194!1.45e-08!63;CL:0000576!1.45e-08!63;CL:0000040!1.45e-08!63;CL:0000559!1.45e-08!63;CL:0002009!3.90e-08!65;CL:0000775!2.40e-07!3;CL:0000898!4.12e-07!3;CL:0000623!7.42e-07!3;CL:0000825!7.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.77e-52;18!CL:0000789;7.77e-52;18!CL:0002419;7.77e-52;18!CL:0000084;1.78e-36;25!CL:0000625;2.29e-35;11!CL:0000094;3.02e-23;8!CL:0000624;3.13e-21;6!CL:0000081;9.53e-17;11!CL:0000775;1.93e-16;3!CL:0000623;3.47e-15;3!CL:0000542;5.92e-14;53!CL:0000771;9.80e-12;2!CL:0000898;3.84e-08;3!CL:0000895;9.04e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.00e-52,18;CL:0000789,3.00e-52,18;CL:0002420,3.00e-52,18;CL:0002419,3.00e-52,18;CL:0000790,3.00e-52,18;CL:0000084,9.04e-37,25;CL:0000827,9.04e-37,25;CL:0000625,1.59e-35,11;CL:0000838,3.85e-27,52;CL:0000542,1.49e-26,53;CL:0000051,1.49e-26,53;CL:0000094,3.34e-23,8;CL:0000624,1.63e-21,6;CL:0000081,1.02e-16,11;CL:0000775,1.93e-16,3;CL:0000738,6.33e-16,136;CL:0000623,3.48e-15,3;CL:0000825,3.48e-15,3;CL:0002032,6.11e-14,161;CL:0000837,6.11e-14,161;CL:0000037,3.90e-13,168;CL:0000988,3.40e-12,177;CL:0000771,9.57e-12,2;CL:0002087,5.62e-10,115;CL:0002031,2.09e-09,120;CL:0000898,3.78e-08,3;CL:0000810,8.81e-07,1;CL:0000895,8.81e-07,1;CL:0002436,8.81e-07,1;CL:0002427,8.81e-07,1;CL:0002428,8.81e-07,1;CL:0002429,8.81e-07,1;CL:0002433,8.81e-07,1;CL:0002431,8.81e-07,1;CL:0002432,8.81e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;7.77e-52;18!CL:0000051;5.92e-14;53!CL:0002427;9.04e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-16!102;UBERON:0003061!2.10e-16!102;UBERON:0002193!5.74e-15!112;UBERON:0002384!7.38e-10!375;UBERON:0002371!1.53e-08!80;UBERON:0002405!1.57e-07!115;UBERON:0001474!1.65e-07!86;UBERON:0000178!7.87e-07!15;UBERON:0000179!7.87e-07!15;UBERON:0000463!7.87e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.10e-16!102;UBERON:0003061!2.10e-16!102;UBERON:0002193!5.74e-15!112;UBERON:0002384!7.38e-10!375;UBERON:0002371!1.53e-08!80;UBERON:0002405!1.57e-07!115;UBERON:0001474!1.65e-07!86;UBERON:0000178!7.87e-07!15;UBERON:0000179!7.87e-07!15;UBERON:0000463!7.87e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p16@CDC42SE2 | |short_description=p16@CDC42SE2 | ||
}} | }} |
Latest revision as of 03:32, 20 September 2015
Short description: | p16@CDC42SE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CDC42SE2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 16bp_to_ENST00000515533_5end |
EntrezGene: | CDC42SE2 |
HGNC: | 18547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data