FFCP PHASE1:Hg19::chrX:153671163..153671183,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4226 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-465bp_to_EF212248_5end | |||
|cluster_id=chrX:153671163..153671183,+ | |||
|description=CAGE_peak_7_at_GDI1_5end | |||
|id=chrX:153671163..153671183,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.37e-16!86;UBERON:0001017!1.12e-15!82;UBERON:0000073!5.09e-15!94;UBERON:0001016!5.09e-15!94;UBERON:0001049!6.28e-14!57;UBERON:0005068!6.28e-14!57;UBERON:0006241!6.28e-14!57;UBERON:0007135!6.28e-14!57;UBERON:0000955!4.09e-12!69;UBERON:0006238!4.09e-12!69;UBERON:0002780!8.53e-12!41;UBERON:0001890!8.53e-12!41;UBERON:0006240!8.53e-12!41;UBERON:0001893!2.32e-11!34;UBERON:0002020!3.39e-11!34;UBERON:0003528!3.39e-11!34;UBERON:0002616!4.29e-11!59;UBERON:0002791!5.82e-11!33;UBERON:0003080!6.47e-11!42;UBERON:0001869!1.04e-10!32;UBERON:0002346!7.44e-10!90;UBERON:0003075!2.61e-09!86;UBERON:0007284!2.61e-09!86;UBERON:0000956!3.15e-09!25;UBERON:0000203!3.15e-09!25;UBERON:0002619!5.67e-09!22;UBERON:0000924!1.20e-08!173;UBERON:0006601!1.20e-08!173;UBERON:0000468!2.34e-08!659;UBERON:0004121!3.67e-08!169;UBERON:0000033!5.15e-08!123;UBERON:0001950!5.52e-08!20;UBERON:0003056!6.79e-08!61;UBERON:0000153!1.29e-07!129;UBERON:0007811!1.29e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.66e-12;34!UBERON:0002619;8.05e-12;22!UBERON:0003528;1.02e-11;34!UBERON:0002020;1.02e-11;34!UBERON:0002791;1.19e-11;32!UBERON:0001869;1.20e-11;32!UBERON:0000956;2.23e-11;25!UBERON:0000203;2.23e-11;25!UBERON:0001950;1.57e-10;20!UBERON:0002780;1.39e-09;41!UBERON:0001890;1.39e-09;41!UBERON:0000073;1.72e-09;53!UBERON:0002616;1.72e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.84e-18,81;UBERON:0001049,3.11e-17,56;UBERON:0005068,3.11e-17,56;UBERON:0006241,3.11e-17,56;UBERON:0007135,3.11e-17,56;UBERON:0000073,6.09e-16,53;UBERON:0002616,6.09e-16,53;UBERON:0001016,1.76e-15,89;UBERON:0002780,2.08e-14,41;UBERON:0001890,2.08e-14,41;UBERON:0003080,2.08e-14,41;UBERON:0006240,2.08e-14,41;UBERON:0001893,2.71e-14,34;UBERON:0000955,4.26e-14,68;UBERON:0006238,4.26e-14,68;UBERON:0003528,4.44e-14,34;UBERON:0002020,4.44e-14,34;UBERON:0002791,1.52e-13,32;UBERON:0001869,1.95e-13,32;UBERON:0002619,4.86e-12,22;UBERON:0000956,9.14e-12,25;UBERON:0000203,9.14e-12,25;UBERON:0002346,1.29e-11,86;UBERON:0003075,1.31e-11,82;UBERON:0007284,1.31e-11,82;UBERON:0001950,1.01e-10,20;UBERON:0003056,1.66e-10,61;UBERON:0010371,1.10e-09,104;UBERON:0004121,1.25e-09,171;UBERON:0000924,1.25e-09,171;UBERON:0006601,1.25e-09,171;UBERON:0010314,1.70e-08,132 | |||
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| |||
|short_description=p7@GDI1 | |||
}} |
Latest revision as of 03:32, 20 September 2015
Short description: | p7@GDI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GDI1_5end |
Coexpression cluster: | NA |
Association with transcript: | -465bp_to_EF212248_5end |
EntrezGene: | GDI1 |
HGNC: | 4226 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.84e-18 | 81 |
neural tube | 3.11e-17 | 56 |
neural rod | 3.11e-17 | 56 |
future spinal cord | 3.11e-17 | 56 |
neural keel | 3.11e-17 | 56 |
regional part of nervous system | 6.09e-16 | 53 |
regional part of brain | 6.09e-16 | 53 |
nervous system | 1.76e-15 | 89 |
regional part of forebrain | 2.08e-14 | 41 |
forebrain | 2.08e-14 | 41 |
anterior neural tube | 2.08e-14 | 41 |
future forebrain | 2.08e-14 | 41 |
telencephalon | 2.71e-14 | 34 |
brain | 4.26e-14 | 68 |
future brain | 4.26e-14 | 68 |
brain grey matter | 4.44e-14 | 34 |
gray matter | 4.44e-14 | 34 |
regional part of telencephalon | 1.52e-13 | 32 |
cerebral hemisphere | 1.95e-13 | 32 |
regional part of cerebral cortex | 4.86e-12 | 22 |
cerebral cortex | 9.14e-12 | 25 |
pallium | 9.14e-12 | 25 |
neurectoderm | 1.29e-11 | 86 |
neural plate | 1.31e-11 | 82 |
presumptive neural plate | 1.31e-11 | 82 |
neocortex | 1.01e-10 | 20 |
pre-chordal neural plate | 1.66e-10 | 61 |
ecto-epithelium | 1.10e-09 | 104 |
ectoderm-derived structure | 1.25e-09 | 171 |
ectoderm | 1.25e-09 | 171 |
presumptive ectoderm | 1.25e-09 | 171 |
structure with developmental contribution from neural crest | 1.70e-08 | 132 |