FFCP PHASE1:Hg19::chr6:12011943..12012015,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:12011943..12012015,+
|short_description=p2@HIVEP1
|description=CAGE_peak_2_at_HIVEP1_5end
|association_with_transcript=-217bp_to_ENST00000487103_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3096 | |EntrezGene=3096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4920 | |HGNC=4920 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2N3 | |UniProt=C9J2N3 | ||
|association_with_transcript=-217bp_to_ENST00000487103_5end | |||
|cluster_id=chr6:12011943..12012015,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_HIVEP1_5end | |||
|id=chr6:12011943..12012015,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.68e-26!42;CL:0000860!1.05e-23!45;CL:0000766!1.82e-19!76;CL:0000738!5.14e-19!140;CL:0000557!1.35e-16!71;CL:0002009!1.97e-16!65;CL:0002194!2.20e-15!63;CL:0000576!2.20e-15!63;CL:0000040!2.20e-15!63;CL:0000559!2.20e-15!63;CL:0000839!1.09e-13!70;CL:0002087!5.67e-13!119;CL:0002031!1.22e-11!124;CL:0000988!2.07e-08!182;CL:0000037!2.18e-08!172;CL:0000566!2.18e-08!172;CL:0000081!1.67e-07!11;CL:0000763!2.96e-07!112;CL:0000049!2.96e-07!112;CL:0002032!5.16e-07!165;CL:0000837!5.16e-07!165;CL:0002393!7.57e-07!9;CL:0002397!7.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.48e-20;33!CL:0002057;6.48e-20;33!CL:0000473;4.13e-15;39!CL:0000234;4.13e-15;39!CL:0000576;1.57e-14;48!CL:0000766;1.46e-11;69!CL:0000081;1.00e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.05e-27,42;CL:0002057,7.05e-27,42;CL:0000473,3.26e-24,48;CL:0000234,3.26e-24,48;CL:0000766,1.26e-21,72;CL:0000738,1.47e-20,136;CL:0000557,1.41e-18,67;CL:0002009,1.86e-18,61;CL:0002194,2.42e-17,59;CL:0000576,2.42e-17,59;CL:0000040,2.42e-17,59;CL:0000559,2.42e-17,59;CL:0000839,2.13e-15,66;CL:0002087,3.52e-14,115;CL:0002031,9.15e-13,120;CL:0000037,1.99e-09,168;CL:0000988,2.72e-09,177;CL:0000763,2.43e-08,108;CL:0000049,2.43e-08,108;CL:0002032,6.09e-08,161;CL:0000837,6.09e-08,161;CL:0000081,1.36e-07,11;CL:0002393,6.30e-07,9;CL:0002397,6.30e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.61e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.25e-16!102;UBERON:0003061!8.25e-16!102;UBERON:0002193!2.35e-15!112;UBERON:0002371!8.03e-14!80;UBERON:0001474!3.10e-13!86;UBERON:0002405!2.41e-11!115;UBERON:0004765!1.82e-10!101;UBERON:0001434!1.82e-10!101;UBERON:0003081!4.07e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.73e-17,98;UBERON:0003061,1.73e-17,98;UBERON:0002193,9.19e-17,108;UBERON:0002371,1.59e-15,76;UBERON:0001474,8.40e-15,82;UBERON:0002405,3.66e-14,93;UBERON:0004765,5.71e-12,90;UBERON:0003081,1.57e-11,203;UBERON:0001434,2.63e-10,100 | |||
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| ||
|short_description=p2@HIVEP1 | |||
}} | }} |
Latest revision as of 03:29, 20 September 2015
Short description: | p2@HIVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIVEP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -217bp_to_ENST00000487103_5end |
EntrezGene: | HIVEP1 |
HGNC: | 4920 |
UniProt: | C9J2N3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.05e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.05e-27 | 42 |
defensive cell | 3.26e-24 | 48 |
phagocyte | 3.26e-24 | 48 |
myeloid leukocyte | 1.26e-21 | 72 |
leukocyte | 1.47e-20 | 136 |
granulocyte monocyte progenitor cell | 1.41e-18 | 67 |
macrophage dendritic cell progenitor | 1.86e-18 | 61 |
monopoietic cell | 2.42e-17 | 59 |
monocyte | 2.42e-17 | 59 |
monoblast | 2.42e-17 | 59 |
promonocyte | 2.42e-17 | 59 |
myeloid lineage restricted progenitor cell | 2.13e-15 | 66 |
nongranular leukocyte | 3.52e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 9.15e-13 | 120 |
hematopoietic stem cell | 1.99e-09 | 168 |
hematopoietic cell | 2.72e-09 | 177 |
myeloid cell | 2.43e-08 | 108 |
common myeloid progenitor | 2.43e-08 | 108 |
hematopoietic oligopotent progenitor cell | 6.09e-08 | 161 |
hematopoietic multipotent progenitor cell | 6.09e-08 | 161 |
blood cell | 1.36e-07 | 11 |
intermediate monocyte | 6.30e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.73e-17 | 98 |
blood island | 1.73e-17 | 98 |
hemolymphoid system | 9.19e-17 | 108 |
bone marrow | 1.59e-15 | 76 |
bone element | 8.40e-15 | 82 |
immune system | 3.66e-14 | 93 |
skeletal element | 5.71e-12 | 90 |
lateral plate mesoderm | 1.57e-11 | 203 |
skeletal system | 2.63e-10 | 100 |