FFCP PHASE1:Hg19::chr3:124873857..124873866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84561 | |EntrezGene=84561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15595 | |HGNC=15595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000485849_5end | |association_with_transcript=42bp_to_ENST00000485849_5end | ||
|cluster_id=chr3:124873857..124873866,- | |||
|description=CAGE_peak_30_at_SLC12A8_5end | |description=CAGE_peak_30_at_SLC12A8_5end | ||
|id=chr3:124873857..124873866,- | |id=chr3:124873857..124873866,- | ||
|ontology_enrichment_celltype=CL:0002057!9.05e-65!42;CL:0000860!3.52e-60!45;CL:0002194!4.31e-41!63;CL:0000576!4.31e-41!63;CL:0000040!4.31e-41!63;CL:0000559!4.31e-41!63;CL:0002009!1.01e-39!65;CL:0000839!1.24e-36!70;CL:0000557!4.59e-36!71;CL:0000766!1.88e-33!76;CL:0002087!2.29e-24!119;CL:0000763!9.64e-24!112;CL:0000049!9.64e-24!112;CL:0002031!4.87e-21!124;CL:0000738!4.57e-20!140;CL:0002032!4.79e-18!165;CL:0000837!4.79e-18!165;CL:0000037!3.98e-17!172;CL:0000566!3.98e-17!172;CL:0000988!6.19e-16!182;CL:0002336!1.64e-07!1;CL:0002261!1.64e-07!1;CL:0002170!1.64e-07!1 | |ontology_enrichment_celltype=CL:0002057!9.05e-65!42;CL:0000860!3.52e-60!45;CL:0002194!4.31e-41!63;CL:0000576!4.31e-41!63;CL:0000040!4.31e-41!63;CL:0000559!4.31e-41!63;CL:0002009!1.01e-39!65;CL:0000839!1.24e-36!70;CL:0000557!4.59e-36!71;CL:0000766!1.88e-33!76;CL:0002087!2.29e-24!119;CL:0000763!9.64e-24!112;CL:0000049!9.64e-24!112;CL:0002031!4.87e-21!124;CL:0000738!4.57e-20!140;CL:0002032!4.79e-18!165;CL:0000837!4.79e-18!165;CL:0000037!3.98e-17!172;CL:0000566!3.98e-17!172;CL:0000988!6.19e-16!182;CL:0002336!1.64e-07!1;CL:0002261!1.64e-07!1;CL:0002170!1.64e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.69e-21;33!CL:0002057;8.69e-21;33!CL:0000473;1.03e-13;39!CL:0000234;1.03e-13;39!CL:0000576;2.38e-09;48!CL:0000766;1.59e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-15,42;CL:0002057,1.01e-15,42;CL:0000473,7.54e-14,48;CL:0000234,7.54e-14,48;CL:0002194,3.21e-11,59;CL:0000576,3.21e-11,59;CL:0000040,3.21e-11,59;CL:0000559,3.21e-11,59;CL:0002009,7.02e-11,61;CL:0000839,4.06e-10,66;CL:0000557,5.60e-10,67;CL:0000766,2.44e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-10;42 | |||
|ontology_enrichment_disease=DOID:12603!1.26e-07!1 | |ontology_enrichment_disease=DOID:12603!1.26e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.35e-31!80;UBERON:0001474!3.97e-29!86;UBERON:0004765!3.16e-24!101;UBERON:0001434!3.16e-24!101;UBERON:0002390!5.97e-24!102;UBERON:0003061!5.97e-24!102;UBERON:0002193!1.85e-21!112;UBERON:0002405!8.55e-21!115;UBERON:0002204!4.75e-13!167;UBERON:0003081!3.77e-09!216;UBERON:0001154!8.51e-08!1;UBERON:0001153!8.51e-08!1;UBERON:0002336!1.87e-07!1;UBERON:0001018!1.87e-07!1;UBERON:0002473!1.87e-07!1;UBERON:0005340!1.87e-07!1;UBERON:0002316!1.87e-07!1;UBERON:0003544!1.87e-07!1;UBERON:0001020!1.87e-07!1;UBERON:0005970!1.87e-07!1;UBERON:0002437!1.87e-07!1;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-09,76;UBERON:0001474,2.75e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.19e-07,93;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98;UBERON:0001434,6.51e-07,100 | |||
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|short_description=p30@SLC12A8 | |short_description=p30@SLC12A8 | ||
}} | }} |
Latest revision as of 03:19, 20 September 2015
Short description: | p30@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_SLC12A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000485849_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-15 | 42 |
defensive cell | 7.54e-14 | 48 |
phagocyte | 7.54e-14 | 48 |
monopoietic cell | 3.21e-11 | 59 |
monocyte | 3.21e-11 | 59 |
monoblast | 3.21e-11 | 59 |
promonocyte | 3.21e-11 | 59 |
macrophage dendritic cell progenitor | 7.02e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.06e-10 | 66 |
granulocyte monocyte progenitor cell | 5.60e-10 | 67 |
myeloid leukocyte | 2.44e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-09 | 76 |
bone element | 2.75e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.19e-07 | 93 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
skeletal system | 6.51e-07 | 100 |