FFCP PHASE1:Hg19::chr12:6884309..6884310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-120bp_to_ENST00000542258_5end | |||
|cluster_id=chr12:6884309..6884310,+ | |||
|description=CAGE_peak_11_at_LAG3_5end | |||
|id=chr12:6884309..6884310,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.92e-26!18;CL:0000789!7.92e-26!18;CL:0002420!7.92e-26!18;CL:0002419!7.92e-26!18;CL:0000790!7.92e-26!18;CL:0000084!2.68e-18!25;CL:0000827!2.68e-18!25;CL:0000625!1.59e-17!11;CL:0000838!1.38e-15!52;CL:0000893!1.54e-15!2;CL:0002489!1.54e-15!2;CL:0000809!1.54e-15!2;CL:0000808!1.54e-15!2;CL:0000894!1.54e-15!2;CL:0000806!1.54e-15!2;CL:0000807!1.54e-15!2;CL:0000805!1.54e-15!2;CL:0002425!1.54e-15!2;CL:0000542!2.96e-15!53;CL:0000051!2.96e-15!53;CL:0000738!7.23e-14!140;CL:0002087!3.03e-11!119;CL:0000767!4.66e-11!3;CL:0000898!8.90e-11!3;CL:0000623!9.35e-11!3;CL:0000825!9.35e-11!3;CL:0000037!1.14e-10!172;CL:0000566!1.14e-10!172;CL:0000988!6.70e-10!182;CL:0002032!7.98e-10!165;CL:0000837!7.98e-10!165;CL:0002031!3.99e-09!124;CL:0000094!4.83e-09!8;CL:0000810!9.74e-09!1;CL:0000895!9.74e-09!1;CL:0002436!9.74e-09!1;CL:0002427!9.74e-09!1;CL:0002428!9.74e-09!1;CL:0002429!9.74e-09!1;CL:0002433!9.74e-09!1;CL:0002431!9.74e-09!1;CL:0002432!9.74e-09!1;CL:0002127!1.65e-08!1;CL:0000914!1.65e-08!1;CL:0000911!1.65e-08!1;CL:0000814!1.65e-08!1;CL:0002042!1.65e-08!1;CL:0002039!1.65e-08!1;CL:0002040!1.65e-08!1;CL:0002041!1.65e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.65e-48;11!CL:0000791;9.17e-30;18!CL:0000789;9.17e-30;18!CL:0002419;9.17e-30;18!CL:0000084;1.21e-21;25!CL:0000226;2.45e-12;3!CL:0000767;2.45e-12;3!CL:0000842;2.45e-12;3!CL:0000542;2.82e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.24e-48,11;CL:0000791,8.52e-30,18;CL:0000789,8.52e-30,18;CL:0002420,8.52e-30,18;CL:0002419,8.52e-30,18;CL:0000790,8.52e-30,18;CL:0000084,1.15e-21,25;CL:0000827,1.15e-21,25;CL:0000226,2.07e-12,3;CL:0000842,2.07e-12,3;CL:0000767,3.24e-12,3;CL:0000838,9.58e-11,52;CL:0000542,1.49e-10,53;CL:0000051,1.49e-10,53;CL:0000738,4.36e-09,136;CL:0002087,1.44e-07,115;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;9.17e-30;18!CL:0000051;2.82e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0002370!3.22e-08!4;UBERON:0005058!3.22e-08!4;UBERON:0009113!3.22e-08!4;UBERON:0003295!3.22e-08!4;UBERON:0005562!3.22e-08!4;UBERON:0001042!4.91e-07!10;UBERON:0009145!4.91e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p11@LAG3 | |||
}} | }} |
Latest revision as of 03:14, 20 September 2015
Short description: | p11@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LAG3_5end |
Coexpression cluster: | NA |
Association with transcript: | -120bp_to_ENST00000542258_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.24e-48 | 11 |
mature alpha-beta T cell | 8.52e-30 | 18 |
alpha-beta T cell | 8.52e-30 | 18 |
immature T cell | 8.52e-30 | 18 |
mature T cell | 8.52e-30 | 18 |
immature alpha-beta T cell | 8.52e-30 | 18 |
T cell | 1.15e-21 | 25 |
pro-T cell | 1.15e-21 | 25 |
single nucleate cell | 2.07e-12 | 3 |
mononuclear cell | 2.07e-12 | 3 |
basophil | 3.24e-12 | 3 |
lymphoid lineage restricted progenitor cell | 9.58e-11 | 52 |
lymphocyte | 1.49e-10 | 53 |
common lymphoid progenitor | 1.49e-10 | 53 |
leukocyte | 4.36e-09 | 136 |
nongranular leukocyte | 1.44e-07 | 115 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |