FFCP PHASE1:Hg19::chr12:6881717..6881737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt=P18627 | |UniProt=P18627 | ||
|association_with_transcript=31bp_to_ENST00000203629_5end | |association_with_transcript=31bp_to_ENST00000203629_5end | ||
|cluster_id=chr12:6881717..6881737,+ | |||
|coexpression_cluster_id=C2233 | |||
|description=CAGE_peak_3_at_LAG3_5end | |description=CAGE_peak_3_at_LAG3_5end | ||
|id=chr12:6881717..6881737,+ | |id=chr12:6881717..6881737,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.21e-16!18;CL:0000789!2.21e-16!18;CL:0002420!2.21e-16!18;CL:0002419!2.21e-16!18;CL:0000790!2.21e-16!18;CL:0000084!4.25e-12!25;CL:0000827!4.25e-12!25;CL:0000625!4.74e-12!11;CL:0000838!3.70e-10!52;CL:0000542!8.03e-10!53;CL:0000051!8.03e-10!53;CL:0000738!3.21e-07!140;CL:0002087!5.38e-07!119 | |ontology_enrichment_celltype=CL:0000791!2.21e-16!18;CL:0000789!2.21e-16!18;CL:0002420!2.21e-16!18;CL:0002419!2.21e-16!18;CL:0000790!2.21e-16!18;CL:0000084!4.25e-12!25;CL:0000827!4.25e-12!25;CL:0000625!4.74e-12!11;CL:0000838!3.70e-10!52;CL:0000542!8.03e-10!53;CL:0000051!8.03e-10!53;CL:0000738!3.21e-07!140;CL:0002087!5.38e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.84e-19;11!CL:0000791;1.54e-14;18!CL:0000789;1.54e-14;18!CL:0002419;1.54e-14;18!CL:0000084;1.81e-12;25!CL:0002619;1.04e-11;3!CL:0000623;2.56e-11;3!CL:0000542;6.90e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.64e-20,11;CL:0000838,9.38e-18,52;CL:0000542,2.47e-17,53;CL:0000051,2.47e-17,53;CL:0000791,9.95e-15,18;CL:0000789,9.95e-15,18;CL:0002420,9.95e-15,18;CL:0002419,9.95e-15,18;CL:0000790,9.95e-15,18;CL:0000084,1.28e-12,25;CL:0000827,1.28e-12,25;CL:0002619,8.13e-12,3;CL:0000623,3.01e-11,3;CL:0000825,3.01e-11,3;CL:0002087,2.29e-09,115;CL:0000738,6.92e-09,136;CL:0002031,8.99e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.54e-14;18!CL:0000051;6.90e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-14!115;UBERON:0000178!2.00e-10!15;UBERON:0000179!2.00e-10!15;UBERON:0000463!2.00e-10!15;UBERON:0004177!5.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-07;15!UBERON:0000179;1.84e-07;15!UBERON:0000463;1.84e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.26e-07,15;UBERON:0000179,1.26e-07,15;UBERON:0000463,1.26e-07,15 | |||
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| ||
|short_description=p3@LAG3 | |short_description=p3@LAG3 | ||
}} | }} |
Latest revision as of 03:12, 20 September 2015
Short description: | p3@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAG3_5end |
Coexpression cluster: | C2233_CD4_NK_spleen_adult_lymphangiectasia_appendix_CD8 |
Association with transcript: | 31bp_to_ENST00000203629_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | P18627 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.64e-20 | 11 |
lymphoid lineage restricted progenitor cell | 9.38e-18 | 52 |
lymphocyte | 2.47e-17 | 53 |
common lymphoid progenitor | 2.47e-17 | 53 |
mature alpha-beta T cell | 9.95e-15 | 18 |
alpha-beta T cell | 9.95e-15 | 18 |
immature T cell | 9.95e-15 | 18 |
mature T cell | 9.95e-15 | 18 |
immature alpha-beta T cell | 9.95e-15 | 18 |
T cell | 1.28e-12 | 25 |
pro-T cell | 1.28e-12 | 25 |
adult endothelial progenitor cell | 8.13e-12 | 3 |
natural killer cell | 3.01e-11 | 3 |
pro-NK cell | 3.01e-11 | 3 |
nongranular leukocyte | 2.29e-09 | 115 |
leukocyte | 6.92e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 8.99e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.26e-07 | 15 |
haemolymphatic fluid | 1.26e-07 | 15 |
organism substance | 1.26e-07 | 15 |