FFCP PHASE1:Hg19::chr12:6881717..6881737,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6476 | |||
|TSSclassifier=strong | |||
|UniProt=P18627 | |||
|association_with_transcript=31bp_to_ENST00000203629_5end | |||
|cluster_id=chr12:6881717..6881737,+ | |||
|coexpression_cluster_id=C2233 | |||
|description=CAGE_peak_3_at_LAG3_5end | |||
|id=chr12:6881717..6881737,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.21e-16!18;CL:0000789!2.21e-16!18;CL:0002420!2.21e-16!18;CL:0002419!2.21e-16!18;CL:0000790!2.21e-16!18;CL:0000084!4.25e-12!25;CL:0000827!4.25e-12!25;CL:0000625!4.74e-12!11;CL:0000838!3.70e-10!52;CL:0000542!8.03e-10!53;CL:0000051!8.03e-10!53;CL:0000738!3.21e-07!140;CL:0002087!5.38e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.84e-19;11!CL:0000791;1.54e-14;18!CL:0000789;1.54e-14;18!CL:0002419;1.54e-14;18!CL:0000084;1.81e-12;25!CL:0002619;1.04e-11;3!CL:0000623;2.56e-11;3!CL:0000542;6.90e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.64e-20,11;CL:0000838,9.38e-18,52;CL:0000542,2.47e-17,53;CL:0000051,2.47e-17,53;CL:0000791,9.95e-15,18;CL:0000789,9.95e-15,18;CL:0002420,9.95e-15,18;CL:0002419,9.95e-15,18;CL:0000790,9.95e-15,18;CL:0000084,1.28e-12,25;CL:0000827,1.28e-12,25;CL:0002619,8.13e-12,3;CL:0000623,3.01e-11,3;CL:0000825,3.01e-11,3;CL:0002087,2.29e-09,115;CL:0000738,6.92e-09,136;CL:0002031,8.99e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.54e-14;18!CL:0000051;6.90e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-14!115;UBERON:0000178!2.00e-10!15;UBERON:0000179!2.00e-10!15;UBERON:0000463!2.00e-10!15;UBERON:0004177!5.18e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-07;15!UBERON:0000179;1.84e-07;15!UBERON:0000463;1.84e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.26e-07,15;UBERON:0000179,1.26e-07,15;UBERON:0000463,1.26e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36881557818649,2.21671591514854,2.2826126580967,1.18009283054671,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,2.46307021663917,2.59114932815184,4.12120908214698,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.393419540227666,0.393010762749165,0.205601498999509,0.501559486172034,0,0,0,10.5839934040915,0.883817722424512,1.77227115666897,1.35401931882508,17.4204194826918,16.5175371401045,0.986627427622057,1.38175008892924,1.15921234294021,0.14828656316206,0.535081656179426,0,1.13309342697566,0.383220493601921,0,1.26509846009751,0.318565414324097,0.651083453856419,1.90090408889675,2.25862678616659,2.17577238962511,0,2.13099526839615,1.64225599384209,3.83052812126992,2.67440195783507,2.60683926989038,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.851363990735132,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.494048758932,2.75843064282698,3.23441362289276,1.15508732651774,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,1.33953315142039,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0.443430153536676,0,1.52234282769651,0,1.70894156152249,0.238231775457789,1.23408681925858,0.648473311192717,1.62009431171434,0.79312517629427,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,7.68959351514601,0,0,0,0,0,0,0,0,2.11125408127993,0,5.24939439509181,0,0,1.35393286007176,0,0,0,0,0.591860433821602,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0.108647371922008,0.31900115973192,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0,0,0.202203398942031,0.802577647298789,0,0,0,0,1.18375320854817,0,0,0.758238955541855,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0,0,0.137539436597234,0,1.799791132412,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0.662091970365432,1.017074150619,0,0,0,0,0,0,0,1.02586563574658,0,0,0,0,0,0.747511887973863,0.157204305099666,1.24271716604159,0.992332043623902,3.557009374163,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71598495454355,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0.47775168788705,0.214429632529969,0,2.09234565662625,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,0,0,0.196308467114945,0,0,0,7.61269735636814,2.06265241515447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,1.51557396436479,1.87574891109325,0.829169439458779,0,0.213233981900981,0,0.710478008196067,0.682821857254437,0,0.12729431655633,0.202117188958219,0.435433495793923,0,3.97377112786066,0.573777643141411,0,0,0.213454691755431,0,0,0,0.488965776731466,0,0,0.402547587182052,1.28227396921293 | |||
|short_description=p3@LAG3 | |||
}} |
Latest revision as of 03:12, 20 September 2015
Short description: | p3@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAG3_5end |
Coexpression cluster: | C2233_CD4_NK_spleen_adult_lymphangiectasia_appendix_CD8 |
Association with transcript: | 31bp_to_ENST00000203629_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | P18627 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.64e-20 | 11 |
lymphoid lineage restricted progenitor cell | 9.38e-18 | 52 |
lymphocyte | 2.47e-17 | 53 |
common lymphoid progenitor | 2.47e-17 | 53 |
mature alpha-beta T cell | 9.95e-15 | 18 |
alpha-beta T cell | 9.95e-15 | 18 |
immature T cell | 9.95e-15 | 18 |
mature T cell | 9.95e-15 | 18 |
immature alpha-beta T cell | 9.95e-15 | 18 |
T cell | 1.28e-12 | 25 |
pro-T cell | 1.28e-12 | 25 |
adult endothelial progenitor cell | 8.13e-12 | 3 |
natural killer cell | 3.01e-11 | 3 |
pro-NK cell | 3.01e-11 | 3 |
nongranular leukocyte | 2.29e-09 | 115 |
leukocyte | 6.92e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 8.99e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.26e-07 | 15 |
haemolymphatic fluid | 1.26e-07 | 15 |
organism substance | 1.26e-07 | 15 |