FFCP PHASE1:Hg19::chr6:89793863..89793891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10957 | |EntrezGene=10957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17278 | |HGNC=17278 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXV2 | |UniProt=Q9BXV2 | ||
|association_with_transcript=111bp_to_AF279899_5end | |association_with_transcript=111bp_to_AF279899_5end | ||
|cluster_id=chr6:89793863..89793891,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_6_at_PNRC1_5end | |description=CAGE_peak_6_at_PNRC1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!3.90e-29!140;CL:0002057!6.23e-24!42;CL:0002031!3.41e-23!124;CL:0002087!7.32e-23!119;CL:0000860!1.32e-22!45;CL:0000766!1.42e-20!76;CL:0000037!1.68e-18!172;CL:0000566!1.68e-18!172;CL:0002009!1.16e-17!65;CL:0000557!1.40e-17!71;CL:0000839!2.09e-17!70;CL:0002032!2.85e-17!165;CL:0000837!2.85e-17!165;CL:0002194!6.66e-17!63;CL:0000576!6.66e-17!63;CL:0000040!6.66e-17!63;CL:0000559!6.66e-17!63;CL:0000988!1.82e-16!182;CL:0000763!1.69e-11!112;CL:0000049!1.69e-11!112;CL:0000134!5.85e-07!358 | |ontology_enrichment_celltype=CL:0000738!3.90e-29!140;CL:0002057!6.23e-24!42;CL:0002031!3.41e-23!124;CL:0002087!7.32e-23!119;CL:0000860!1.32e-22!45;CL:0000766!1.42e-20!76;CL:0000037!1.68e-18!172;CL:0000566!1.68e-18!172;CL:0002009!1.16e-17!65;CL:0000557!1.40e-17!71;CL:0000839!2.09e-17!70;CL:0002032!2.85e-17!165;CL:0000837!2.85e-17!165;CL:0002194!6.66e-17!63;CL:0000576!6.66e-17!63;CL:0000040!6.66e-17!63;CL:0000559!6.66e-17!63;CL:0000988!1.82e-16!182;CL:0000763!1.69e-11!112;CL:0000049!1.69e-11!112;CL:0000134!5.85e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.28e-29;33!CL:0002057;3.28e-29;33!CL:0000473;7.76e-22;39!CL:0000234;7.76e-22;39!CL:0000576;5.31e-21;48!CL:0000766;6.38e-17;69!CL:0002087;3.84e-10;104!CL:0000738;9.38e-09;136!CL:0002393;1.53e-08;6!CL:0002397;1.53e-08;6!CL:0000094;3.00e-07;8!CL:0000763;4.06e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.28e-29;33!CL:0002057;3.28e-29;33!CL:0000473;7.76e-22;39!CL:0000234;7.76e-22;39!CL:0000576;5.31e-21;48!CL:0000766;6.38e-17;69!CL:0002087;3.84e-10;104!CL:0000738;9.38e-09;136!CL:0002393;1.53e-08;6!CL:0002397;1.53e-08;6!CL:0000094;3.00e-07;8!CL:0000763;4.06e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.90e-40,42;CL:0002057,2.90e-40,42;CL:0000473,6.46e-38,48;CL:0000234,6.46e-38,48;CL:0000738,1.53e-35,136;CL:0000766,3.15e-33,72;CL:0002087,8.83e-31,115;CL:0002009,7.18e-30,61;CL:0002194,2.19e-29,59;CL:0000576,2.19e-29,59;CL:0000040,2.19e-29,59;CL:0000559,2.19e-29,59;CL:0002031,2.07e-27,120;CL:0000557,2.45e-27,67;CL:0000839,3.27e-26,66;CL:0000037,1.66e-25,168;CL:0002032,2.14e-24,161;CL:0000837,2.14e-24,161;CL:0000988,4.09e-23,177;CL:0000763,3.67e-21,108;CL:0000049,3.67e-21,108;CL:0000134,1.45e-11,354;CL:0002320,6.97e-11,361;CL:0000219,2.14e-09,386;CL:0002393,2.47e-09,9;CL:0002397,2.47e-09,9;CL:0000094,2.80e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-28;42 | |ontology_enrichment_development_v019=CL:0002057;1.70e-28;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.96e-16!102;UBERON:0003061!1.96e-16!102;UBERON:0002193!8.15e-16!112;UBERON:0002371!7.82e-13!80;UBERON:0002405!5.30e-12!115;UBERON:0001474!1.05e-11!86;UBERON:0004765!3.17e-10!101;UBERON:0001434!3.17e-10!101;UBERON:0007023!2.12e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.96e-16!102;UBERON:0003061!1.96e-16!102;UBERON:0002193!8.15e-16!112;UBERON:0002371!7.82e-13!80;UBERON:0002405!5.30e-12!115;UBERON:0001474!1.05e-11!86;UBERON:0004765!3.17e-10!101;UBERON:0001434!3.17e-10!101;UBERON:0007023!2.12e-08!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.27e-24,98;UBERON:0003061,2.27e-24,98;UBERON:0002193,5.41e-23,108;UBERON:0002371,1.60e-22,76;UBERON:0001474,3.66e-21,82;UBERON:0002405,2.75e-20,93;UBERON:0004765,4.12e-18,90;UBERON:0001434,5.23e-17,100;UBERON:0002384,5.78e-10,371;UBERON:0003081,5.26e-09,203;UBERON:0002204,2.21e-07,167 | |||
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| ||
|short_description=p6@PNRC1 | |short_description=p6@PNRC1 | ||
}} | }} |
Latest revision as of 03:08, 20 September 2015
Short description: | p6@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PNRC1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 111bp_to_AF279899_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | Q9BXV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.90e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-40 | 42 |
defensive cell | 6.46e-38 | 48 |
phagocyte | 6.46e-38 | 48 |
leukocyte | 1.53e-35 | 136 |
myeloid leukocyte | 3.15e-33 | 72 |
nongranular leukocyte | 8.83e-31 | 115 |
macrophage dendritic cell progenitor | 7.18e-30 | 61 |
monopoietic cell | 2.19e-29 | 59 |
monocyte | 2.19e-29 | 59 |
monoblast | 2.19e-29 | 59 |
promonocyte | 2.19e-29 | 59 |
hematopoietic lineage restricted progenitor cell | 2.07e-27 | 120 |
granulocyte monocyte progenitor cell | 2.45e-27 | 67 |
myeloid lineage restricted progenitor cell | 3.27e-26 | 66 |
hematopoietic stem cell | 1.66e-25 | 168 |
hematopoietic oligopotent progenitor cell | 2.14e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-24 | 161 |
hematopoietic cell | 4.09e-23 | 177 |
myeloid cell | 3.67e-21 | 108 |
common myeloid progenitor | 3.67e-21 | 108 |
mesenchymal cell | 1.45e-11 | 354 |
connective tissue cell | 6.97e-11 | 361 |
motile cell | 2.14e-09 | 386 |
intermediate monocyte | 2.47e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.47e-09 | 9 |
granulocyte | 2.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.27e-24 | 98 |
blood island | 2.27e-24 | 98 |
hemolymphoid system | 5.41e-23 | 108 |
bone marrow | 1.60e-22 | 76 |
bone element | 3.66e-21 | 82 |
immune system | 2.75e-20 | 93 |
skeletal element | 4.12e-18 | 90 |
skeletal system | 5.23e-17 | 100 |
connective tissue | 5.78e-10 | 371 |
lateral plate mesoderm | 5.26e-09 | 203 |
musculoskeletal system | 2.21e-07 | 167 |