FFCP PHASE1:Hg19::chr6:89793767..89793802,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17278 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXV2 | |||
|association_with_transcript=15bp_to_AF279899_5end | |||
|cluster_id=chr6:89793767..89793802,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_PNRC1_5end | |||
|id=chr6:89793767..89793802,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-24!140;CL:0002057!3.65e-23!42;CL:0000860!8.41e-22!45;CL:0000766!3.82e-21!76;CL:0002031!9.03e-19!124;CL:0002087!4.31e-18!119;CL:0002009!8.94e-17!65;CL:0000557!1.09e-16!71;CL:0002194!2.66e-16!63;CL:0000576!2.66e-16!63;CL:0000040!2.66e-16!63;CL:0000559!2.66e-16!63;CL:0000839!2.91e-16!70;CL:0000037!4.77e-13!172;CL:0000566!4.77e-13!172;CL:0002032!6.90e-12!165;CL:0000837!6.90e-12!165;CL:0000988!7.10e-12!182;CL:0000763!6.73e-09!112;CL:0000049!6.73e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-24;33!CL:0002057;1.87e-24;33!CL:0000473;8.90e-18;39!CL:0000234;8.90e-18;39!CL:0000576;1.77e-16;48!CL:0000766;6.53e-14;69!CL:0002087;6.84e-09;104!CL:0000094;2.02e-07;8!CL:0000738;2.91e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.19e-32,42;CL:0002057,8.19e-32,42;CL:0000738,2.76e-30,136;CL:0000473,8.32e-29,48;CL:0000234,8.32e-29,48;CL:0000766,8.88e-27,72;CL:0002087,1.09e-22,115;CL:0002031,2.35e-22,120;CL:0002009,4.46e-22,61;CL:0002194,2.03e-21,59;CL:0000576,2.03e-21,59;CL:0000040,2.03e-21,59;CL:0000559,2.03e-21,59;CL:0000557,3.69e-21,67;CL:0000839,6.81e-20,66;CL:0000037,1.46e-18,168;CL:0002032,2.96e-17,161;CL:0000837,2.96e-17,161;CL:0000988,1.76e-16,177;CL:0000763,1.03e-13,108;CL:0000049,1.03e-13,108;CL:0000094,1.29e-07,8;CL:0000134,1.42e-07,354;CL:0002320,1.42e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.61e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.83e-16!102;UBERON:0003061!7.83e-16!102;UBERON:0002193!1.50e-15!112;UBERON:0002371!8.58e-14!80;UBERON:0001474!3.81e-12!86;UBERON:0002405!4.23e-12!115;UBERON:0004765!4.93e-09!101;UBERON:0001434!4.93e-09!101;UBERON:0007023!1.78e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.76e-20,98;UBERON:0003061,2.76e-20,98;UBERON:0002193,1.54e-18,108;UBERON:0002371,2.35e-18,76;UBERON:0001474,1.54e-16,82;UBERON:0002405,6.94e-16,93;UBERON:0004765,3.31e-15,90;UBERON:0001434,1.40e-13,100;UBERON:0003081,1.52e-07,203;UBERON:0002384,4.37e-07,371 | |||
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| |||
|short_description=p5@PNRC1 | |||
}} |
Latest revision as of 03:08, 20 September 2015
Short description: | p5@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PNRC1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 15bp_to_AF279899_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | Q9BXV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.19e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.19e-32 | 42 |
leukocyte | 2.76e-30 | 136 |
defensive cell | 8.32e-29 | 48 |
phagocyte | 8.32e-29 | 48 |
myeloid leukocyte | 8.88e-27 | 72 |
nongranular leukocyte | 1.09e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.35e-22 | 120 |
macrophage dendritic cell progenitor | 4.46e-22 | 61 |
monopoietic cell | 2.03e-21 | 59 |
monocyte | 2.03e-21 | 59 |
monoblast | 2.03e-21 | 59 |
promonocyte | 2.03e-21 | 59 |
granulocyte monocyte progenitor cell | 3.69e-21 | 67 |
myeloid lineage restricted progenitor cell | 6.81e-20 | 66 |
hematopoietic stem cell | 1.46e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.96e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-17 | 161 |
hematopoietic cell | 1.76e-16 | 177 |
myeloid cell | 1.03e-13 | 108 |
common myeloid progenitor | 1.03e-13 | 108 |
granulocyte | 1.29e-07 | 8 |
mesenchymal cell | 1.42e-07 | 354 |
connective tissue cell | 1.42e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.76e-20 | 98 |
blood island | 2.76e-20 | 98 |
hemolymphoid system | 1.54e-18 | 108 |
bone marrow | 2.35e-18 | 76 |
bone element | 1.54e-16 | 82 |
immune system | 6.94e-16 | 93 |
skeletal element | 3.31e-15 | 90 |
skeletal system | 1.40e-13 | 100 |
lateral plate mesoderm | 1.52e-07 | 203 |
connective tissue | 4.37e-07 | 371 |