FFCP PHASE1:Hg19::chr3:124732713..124732735,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:124732713..124732735,- to FFCP PHASE1:Hg19::chr3:124732713..124732735,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57493 | |EntrezGene=57493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29227 | |HGNC=29227 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULI3 | |UniProt=Q9ULI3 | ||
|association_with_transcript=-333bp_to_BC067235_5end | |||
|cluster_id=chr3:124732713..124732735,- | |||
|coexpression_cluster_id=C769 | |||
|description=CAGE_peak_2_at_HEG1_5end | |||
|id=chr3:124732713..124732735,- | |||
|ontology_enrichment_celltype=CL:0000055!1.62e-17!180;CL:0000057!9.34e-15!75;CL:0000077!1.48e-09!19;CL:0000192!5.78e-08!42;CL:0000514!5.78e-08!42;CL:0000680!5.96e-07!57;CL:0000056!5.96e-07!57;CL:0000355!5.96e-07!57;CL:0000222!7.11e-07!119;CL:0000187!9.80e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.60e-11;19!CL:0000359;8.21e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.15e-17,76;CL:0000077,4.50e-11,19;CL:0000192,8.17e-09,43;CL:0000514,8.17e-09,43;CL:0000222,1.48e-07,121;CL:0000680,1.52e-07,58;CL:0000056,1.52e-07,58;CL:0000355,1.52e-07,58;CL:0000187,2.76e-07,55;CL:0002334,7.97e-07,12;CL:0000359,8.60e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.12e-08!84;UBERON:0000914!9.50e-08!83;UBERON:0002329!9.50e-08!83;UBERON:0003077!9.50e-08!83;UBERON:0003059!9.50e-08!83;UBERON:0007282!9.50e-08!83;UBERON:0009618!9.50e-08!83;UBERON:0007285!9.50e-08!83;UBERON:0000468!1.44e-07!659;UBERON:0004923!2.04e-07!57;UBERON:0004290!2.79e-07!70;UBERON:0001134!3.43e-07!61;UBERON:0002036!3.43e-07!61;UBERON:0003082!3.43e-07!61;UBERON:0000467!4.02e-07!625;UBERON:0002385!4.17e-07!63;UBERON:0001015!4.17e-07!63;UBERON:0000383!4.17e-07!63;UBERON:0004573!4.20e-07!33;UBERON:0004571!4.20e-07!33;UBERON:0000480!5.41e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.66e-07;25!UBERON:0000948;8.26e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.68e-08,83;UBERON:0001134,1.30e-07,62;UBERON:0002036,1.30e-07,62;UBERON:0003082,1.30e-07,62;UBERON:0002385,1.83e-07,64;UBERON:0001015,1.83e-07,64;UBERON:0000383,1.83e-07,64;UBERON:0007100,1.85e-07,27;UBERON:0000948,2.38e-07,24;UBERON:0005498,2.38e-07,24;UBERON:0004140,2.38e-07,24;UBERON:0009881,2.38e-07,24;UBERON:0004141,2.38e-07,24;UBERON:0003084,2.38e-07,24;UBERON:0007005,2.38e-07,24;UBERON:0004139,2.38e-07,24;UBERON:0004291,2.38e-07,24;UBERON:0004573,2.64e-07,33;UBERON:0004571,2.64e-07,33;UBERON:0002329,2.82e-07,71;UBERON:0003059,2.82e-07,71;UBERON:0007282,2.82e-07,71;UBERON:0004290,2.82e-07,71;UBERON:0009618,2.82e-07,71;UBERON:0007524,2.97e-07,73;UBERON:0003077,5.67e-07,72;UBERON:0007285,5.67e-07,72;UBERON:0005256,6.97e-07,122;UBERON:0001637,7.86e-07,42;UBERON:0003509,7.86e-07,42;UBERON:0004572,7.86e-07,42 | |||
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| ||
|short_description=p2@HEG1 | |||
}} | }} |
Latest revision as of 03:03, 20 September 2015
Short description: | p2@HEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HEG1_5end |
Coexpression cluster: | C769_Fibroblast_Sertoli_Smooth_Mesothelial_Preadipocyte_Adipocyte_hepatic |
Association with transcript: | -333bp_to_BC067235_5end |
EntrezGene: | HEG1 |
HGNC: | 29227 |
UniProt: | Q9ULI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.15e-17 | 76 |
mesothelial cell | 4.50e-11 | 19 |
smooth muscle cell | 8.17e-09 | 43 |
smooth muscle myoblast | 8.17e-09 | 43 |
mesodermal cell | 1.48e-07 | 121 |
muscle precursor cell | 1.52e-07 | 58 |
myoblast | 1.52e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-07 | 58 |
muscle cell | 2.76e-07 | 55 |
preadipocyte | 7.97e-07 | 12 |
vascular associated smooth muscle cell | 8.60e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 1.68e-08 | 83 |
skeletal muscle tissue | 1.30e-07 | 62 |
striated muscle tissue | 1.30e-07 | 62 |
myotome | 1.30e-07 | 62 |
muscle tissue | 1.83e-07 | 64 |
musculature | 1.83e-07 | 64 |
musculature of body | 1.83e-07 | 64 |
primary circulatory organ | 1.85e-07 | 27 |
heart | 2.38e-07 | 24 |
primitive heart tube | 2.38e-07 | 24 |
primary heart field | 2.38e-07 | 24 |
anterior lateral plate mesoderm | 2.38e-07 | 24 |
heart tube | 2.38e-07 | 24 |
heart primordium | 2.38e-07 | 24 |
cardiac mesoderm | 2.38e-07 | 24 |
cardiogenic plate | 2.38e-07 | 24 |
heart rudiment | 2.38e-07 | 24 |
systemic artery | 2.64e-07 | 33 |
systemic arterial system | 2.64e-07 | 33 |
somite | 2.82e-07 | 71 |
presomitic mesoderm | 2.82e-07 | 71 |
presumptive segmental plate | 2.82e-07 | 71 |
dermomyotome | 2.82e-07 | 71 |
trunk paraxial mesoderm | 2.82e-07 | 71 |
dense mesenchyme tissue | 2.97e-07 | 73 |
paraxial mesoderm | 5.67e-07 | 72 |
presumptive paraxial mesoderm | 5.67e-07 | 72 |
trunk mesenchyme | 6.97e-07 | 122 |
artery | 7.86e-07 | 42 |
arterial blood vessel | 7.86e-07 | 42 |
arterial system | 7.86e-07 | 42 |